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Are these really transcription factors?

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In the spirit of community annotation, we welcome your opinion for any of the putative factors listed in the table below. The first column is the Gene Name. In the second column, add yes or no to the existing votes. LIkewise, use the next two columns to vote on whether or not the gene is a positive or negative regulator. Please feel free to add any comments. Finally, if you have any evidence (literature, personal communications, etc) please add them in that column. This poll is being done in collaboration with ERIC-BRC .

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Contents

A-G

Gene name (bnum)Is this a regulatorPos. regulator?Neg. regulator?CommentsEvidence

cobB (b1120)

<poll>ABE-0003781-regulator? Y|Y N|N</poll>

<poll>ABE-0003781-positive? Y|Y N|N</poll>

<poll>ABE-0003781-negative? Y|Y N|N</poll>

In Salmonella, CobB catalyzes a step in cobalamin synthesis.

CobB has sequence similarity to eukaryotic Sir2 proteins and, in Salmonella, is required for transcription of the prpBCDE operon.

[[PMID:9822644[1]]][1]/> [[PMID:9851993[2]]][2]/>

glpR (b3423)

<poll>ABE-0011176-regulator? Y|Y N|N</poll>

<poll>ABE-0011176-positive? Y|Y N|N</poll>

<poll>ABE-0011176-negative? Y|Y N|N</poll>

Repressor of transcription of genes/operons in the glycerol-3-phosphate regulon.

[[PMID:3316209[3]]][3]/>

betI (b0313)

<poll>ABE-0001076-regulator? Y|Y N|N</poll>

<poll>ABE-0001076-positive? Y|Y N|N</poll>

<poll>ABE-0001076-negative? Y|Y N|N</poll>

[[PMID:8626294[4]]][4]/>

crl (b0240)

<poll>ABE-0000821-regulator? Y|Y N|N</poll>

<poll>ABE-0000821-positive? Y|Y N|N</poll>

<poll>ABE-0000821-negative? Y|Y N|N</poll>

[[PMID:17332743[5]]][5]/>

gntR (b3438)

<poll>ABE-0011226-regulator? Y|Y N|N</poll>

<poll>ABE-0011226-positive? Y|Y N|N</poll>

<poll>ABE-0011226-negative? Y|Y N|N</poll>

Negatively regulates transcription of genes for enzymes involved in the catabolism of D-gluconate via the Entner-Doudoroff pathway.

[[PMID:9537375[6]]][6]/>

cueR (b0487)

<poll>ABE-0001693-regulator? Y|Y N|N</poll>

<poll>ABE-0001693-positive? Y|Y N|N</poll>

<poll>ABE-0001693-negative? Y|Y N|N</poll>

bglG (b3723)

<poll>ABE-0012174-regulator? Y|Y N|N</poll>

<poll>ABE-0012174-positive? Y|Y N|N</poll>

<poll>ABE-0012174-negative? Y|Y N|N</poll>

flhD (b1892)

<poll>ABE-0006303-regulator? Y|Y N|N</poll>

<poll>ABE-0006303-positive? Y|Y N|N</poll>

<poll>ABE-0006303-negative? Y|Y N|N</poll>

aaeR (b3243)

<poll>ABE-0010639-regulator? Y|Y N|N</poll>

<poll>ABE-0010639-positive? Y|Y N|N</poll>

<poll>ABE-0010639-negative? Y|Y N|N</poll>

[[PMID:15489430[7]]][7]/> [[PMID:12011002[8]]][8]/>

abgR (b1339)

<poll>ABE-0004496-regulator? Y|Y N|N</poll>

<poll>ABE-0004496-positive? Y|Y N|N</poll>

<poll>ABE-0004496-negative? Y|Y N|N</poll>

[[PMID:17307853[9]]][9]/>

acrR (b0464)

<poll>ABE-0001608-regulator? Y|Y N|N</poll>

<poll>ABE-0001608-positive? Y|Y N|N</poll>

<poll>ABE-0001608-negative? Y|Y N|N</poll>

ada (b2213)

<poll>ABE-0007311-regulator? Y|Y N|N</poll>

<poll>ABE-0007311-positive? Y|Y N|N</poll>

<poll>ABE-0007311-negative? Y|Y N|N</poll>

adiY (b4116)

<poll>ABE-0013479-regulator? Y|Y N|N</poll>

<poll>ABE-0013479-positive? Y|Y N|N</poll>

<poll>ABE-0013479-negative? Y|Y N|N</poll>

greA (b3181)

<poll>ABE-0010454-regulator? Y|Y N|N</poll>

<poll>ABE-0010454-positive? Y|Y N|N</poll>

<poll>ABE-0010454-negative? Y|Y N|N</poll>

aer (b3072)

<poll>ABE-0010087-regulator? Y|Y N|N</poll>

<poll>ABE-0010087-positive? Y|Y N|N</poll>

<poll>ABE-0010087-negative? Y|Y N|N</poll>

greB (b3406)

<poll>ABE-0011117-regulator? Y|Y N|N</poll>

<poll>ABE-0011117-positive? Y|Y N|N</poll>

<poll>ABE-0011117-negative? Y|Y N|N</poll>

agaR (b3131)

<poll>ABE-0010291-regulator? Y|Y N|N</poll>

<poll>ABE-0010291-positive? Y|Y N|N</poll>

<poll>ABE-0010291-negative? Y|Y N|N</poll>

gutM (b2706)

<poll>ABE-0008898-regulator? Y|Y N|N</poll>

<poll>ABE-0008898-positive? Y|Y N|N</poll>

<poll>ABE-0008898-negative? Y|Y N|N</poll>

allR (b0506)

<poll>ABE-0001750-regulator? Y|Y N|N</poll>

<poll>ABE-0001750-positive? Y|Y N|N</poll>

<poll>ABE-0001750-negative? Y|Y N|N</poll>

alpA (b2624)

<poll>ABE-0008636-regulator? Y|Y N|N</poll>

<poll>ABE-0008636-positive? Y|Y N|N</poll>

<poll>ABE-0008636-negative? Y|Y N|N</poll>

appY (b0564)

<poll>ABE-0001929-regulator? Y|Y N|N</poll>

<poll>ABE-0001929-positive? Y|Y N|N</poll>

<poll>ABE-0001929-negative? Y|Y N|N</poll>

araC (b0064)

<poll>ABE-0000236-regulator? Y|Y N|N</poll>

<poll>ABE-0000236-positive? Y|Y N|N</poll>

<poll>ABE-0000236-negative? Y|Y N|N</poll>

arcA (b4401)

<poll>ABE-0014434-regulator? Y|Y N|N</poll>

<poll>ABE-0014434-positive? Y|Y N|N</poll>

<poll>ABE-0014434-negative? Y|Y N|N</poll>

represses genes in aerobic pathways and activates expression of genes in F

[[PMID:2964639[10]]][10]/>, [[PMID:2565334[11]]][11]/>

arcB (b3210)

<poll>ABE-0010537-regulator? Y|Y N|N</poll>

<poll>ABE-0010537-positive? Y|Y N|N</poll>

<poll>ABE-0010537-negative? Y|Y N|N</poll>

hybrid sensory histidine protein kinase in two-component system with ArcA

[[PMID:2644240[12]]][12]/>

argR (b3237)

<poll>ABE-0010620-regulator? Y|Y N|N</poll>

<poll>ABE-0010620-positive? Y|Y N|N</poll>

<poll>ABE-0010620-negative? Y|Y N|N</poll>

arsR (b3501)

<poll>ABE-0011435-regulator? Y|Y N|N</poll>

<poll>ABE-0011435-positive? Y|Y N|N</poll>

<poll>ABE-0011435-negative? Y|Y N|N</poll>

ascG (b2714)

<poll>ABE-0008922-regulator? Y|Y N|N</poll>

<poll>ABE-0008922-positive? Y|Y N|N</poll>

<poll>ABE-0008922-negative? Y|Y N|N</poll>

asnC (b3743)

<poll>ABE-0012237-regulator? Y|Y N|N</poll>

<poll>ABE-0012237-positive? Y|Y N|N</poll>

<poll>ABE-0012237-negative? Y|Y N|N</poll>

atoC (b2220)

<poll>ABE-0007343-regulator? Y|Y N|N</poll>

<poll>ABE-0007343-positive? Y|Y N|N</poll>

<poll>ABE-0007343-negative? Y|Y N|N</poll>

baeR (b2079)

<poll>ABE-0006884-regulator? Y|Y N|N</poll>

<poll>ABE-0006884-positive? Y|Y N|N</poll>

<poll>ABE-0006884-negative? Y|Y N|N</poll>

barA (b2786)

<poll>ABE-0009131-regulator? Y|Y N|N</poll>

<poll>ABE-0009131-positive? Y|Y N|N</poll>

<poll>ABE-0009131-negative? Y|Y N|N</poll>

basR (b4113)

<poll>ABE-0013466-regulator? Y|Y N|N</poll>

<poll>ABE-0013466-positive? Y|Y N|N</poll>

<poll>ABE-0013466-negative? Y|Y N|N</poll>

bglJ (b4366)

<poll>ABE-0014324-regulator? Y|Y N|N</poll>

<poll>ABE-0014324-positive? Y|Y N|N</poll>

<poll>ABE-0014324-negative? Y|Y N|N</poll>

birA (b3973)

<poll>ABE-0013001-regulator? Y|Y N|N</poll>

<poll>ABE-0013001-positive? Y|Y N|N</poll>

<poll>ABE-0013001-negative? Y|Y N|N</poll>

bolA (b0435)

<poll>ABE-0001508-regulator? Y|Y N|N</poll>

<poll>ABE-0001508-positive? Y|Y N|N</poll>

<poll>ABE-0001508-negative? Y|Y N|N</poll>

cadC (b4133)

<poll>ABE-0013532-regulator? Y|Y N|N</poll>

<poll>ABE-0013532-positive? Y|Y N|N</poll>

<poll>ABE-0013532-negative? Y|Y N|N</poll>

caiF (b0034)

<poll>ABE-0000125-regulator? Y|Y N|N</poll>

<poll>ABE-0000125-positive? Y|Y N|N</poll>

<poll>ABE-0000125-negative? Y|Y N|N</poll>

cbl (b1987)

<poll>ABE-0006590-regulator? Y|Y N|N</poll>

<poll>ABE-0006590-positive? Y|Y N|N</poll>

<poll>ABE-0006590-negative? Y|Y N|N</poll>

[[PMID:8529872[13]]][13]/> [[PMID:14663078[14]]][14]/>

cdaR (b0162)

<poll>ABE-0000554-regulator? Y|Y N|N</poll>

<poll>ABE-0000554-positive? Y|Y N|N</poll>

<poll>ABE-0000554-negative? Y|Y N|N</poll>

celD (b1735)

<poll>ABE-0005790-regulator? Y|Y N|N</poll>

<poll>ABE-0005790-positive? Y|Y N|N</poll>

<poll>ABE-0005790-negative? Y|Y N|N</poll>

chaB (b1217)

<poll>ABE-0004087-regulator? Y|Y N|N</poll>

<poll>ABE-0004087-positive? Y|Y N|N</poll>

<poll>ABE-0004087-negative? Y|Y N|N</poll>

cheB (b1883)

<poll>ABE-0006284-regulator? Y|Y N|N</poll>

<poll>ABE-0006284-positive? Y|Y N|N</poll>

<poll>ABE-0006284-negative? Y|Y N|N</poll>

methyl esterase for chemoreceptors, involved in adaptation to attractants and repellents

cheY (b1882)

<poll>ABE-0006280-regulator? Y|Y N|N</poll>

<poll>ABE-0006280-positive? Y|Y N|N</poll>

<poll>ABE-0006280-negative? Y|Y N|N</poll>

citB (b0620)

<poll>ABE-0002131-regulator? Y|Y N|N</poll>

<poll>ABE-0002131-positive? Y|Y N|N</poll>

<poll>ABE-0002131-negative? Y|Y N|N</poll>

clpB (b2592)

<poll>ABE-0008527-regulator? Y|Y N|N</poll>

<poll>ABE-0008527-positive? Y|Y N|N</poll>

<poll>ABE-0008527-negative? Y|Y N|N</poll>

protein chaperone

[[PMID:10497158[15]]][15]/> [[PMID:10601016[16]]][16]/>

cpxR (b3912)

<poll>ABE-0012774-regulator? Y|Y N|N</poll>

<poll>ABE-0012774-positive? Y|Y N|N</poll>

<poll>ABE-0012774-negative? Y|Y N|N</poll>

creB (b4398)

<poll>ABE-0014428-regulator? Y|Y N|N</poll>

<poll>ABE-0014428-positive? Y|Y N|N</poll>

<poll>ABE-0014428-negative? Y|Y N|N</poll>

crp (b3357)

<poll>ABE-0010970-regulator? Y|Y N|N</poll>

<poll>ABE-0010970-positive? Y|Y N|N</poll>

<poll>ABE-0010970-negative? Y|Y N|N</poll>

csgD (b1040)

<poll>ABE-0003530-regulator? Y|Y N|N</poll>

<poll>ABE-0003530-positive? Y|Y N|N</poll>

<poll>ABE-0003530-negative? Y|Y N|N</poll>

cspA (b3556)

<poll>ABE-0011616-regulator? Y|Y N|N</poll>

<poll>ABE-0011616-positive? Y|Y N|N</poll>

<poll>ABE-0011616-negative? Y|Y N|N</poll>

cspB (b1557)

<poll>ABE-0005199-regulator? Y|Y N|N</poll>

<poll>ABE-0005199-positive? Y|Y N|N</poll>

<poll>ABE-0005199-negative? Y|Y N|N</poll>

cspC (b1823)

<poll>ABE-0006070-regulator? Y|Y N|N</poll>

<poll>ABE-0006070-positive? Y|Y N|N</poll>

<poll>ABE-0006070-negative? Y|Y N|N</poll>

cspD (b0880)

<poll>ABE-0002991-regulator? Y|Y N|N</poll>

<poll>ABE-0002991-positive? Y|Y N|N</poll>

<poll>ABE-0002991-negative? Y|Y N|N</poll>

cspE (b0623)

<poll>ABE-0002142-regulator? Y|Y N|N</poll>

<poll>ABE-0002142-positive? Y|Y N|N</poll>

<poll>ABE-0002142-negative? Y|Y N|N</poll>

cspF (b1558)

<poll>ABE-0005205-regulator? Y|Y N|N</poll>

<poll>ABE-0005205-positive? Y|Y N|N</poll>

<poll>ABE-0005205-negative? Y|Y N|N</poll>

cspG (b0990)

<poll>ABE-0003346-regulator? Y|Y N|N</poll>

<poll>ABE-0003346-positive? Y|Y N|N</poll>

<poll>ABE-0003346-negative? Y|Y N|N</poll>

cspH (b0989)

<poll>ABE-0003341-regulator? Y|Y N|N</poll>

<poll>ABE-0003341-positive? Y|Y N|N</poll>

<poll>ABE-0003341-negative? Y|Y N|N</poll>

cspI (b1552)

<poll>ABE-0005183-regulator? Y|Y N|N</poll>

<poll>ABE-0005183-positive? Y|Y N|N</poll>

<poll>ABE-0005183-negative? Y|Y N|N</poll>

cusR (b0571)

<poll>ABE-0001948-regulator? Y|Y N|N</poll>

<poll>ABE-0001948-positive? Y|Y N|N</poll>

<poll>ABE-0001948-negative? Y|Y N|N</poll>

cynR (b0338)

<poll>ABE-0001165-regulator? Y|Y N|N</poll>

<poll>ABE-0001165-positive? Y|Y N|N</poll>

<poll>ABE-0001165-negative? Y|Y N|N</poll>

[[PMID:7961413[17]]][17]/>

cysB (b1275)

<poll>ABE-0004279-regulator? Y|Y N|N</poll>

<poll>ABE-0004279-positive? Y|Y N|N</poll>

<poll>ABE-0004279-negative? Y|Y N|N</poll>

cytR (b3934)

<poll>ABE-0012853-regulator? Y|Y N|N</poll>

<poll>ABE-0012853-positive? Y|Y N|N</poll>

<poll>ABE-0012853-negative? Y|Y N|N</poll>

CytR represses the deoP2 promoter.

[[PMID:1655726[18]]][18]/>

dcuR (b4124)

<poll>ABE-0013507-regulator? Y|Y N|N</poll>

<poll>ABE-0013507-positive? Y|Y N|N</poll>

<poll>ABE-0013507-negative? Y|Y N|N</poll>

deaD (b3162)

<poll>ABE-0010392-regulator? Y|Y N|N</poll>

<poll>ABE-0010392-positive? Y|Y N|N</poll>

<poll>ABE-0010392-negative? Y|Y N|N</poll>

deoR (b0840)

<poll>ABE-0002862-regulator? Y|Y N|N</poll>

<poll>ABE-0002862-positive? Y|Y N|N</poll>

<poll>ABE-0002862-negative? Y|Y N|N</poll>

dgoR (b4479)

<poll>ABE-0174108-regulator? Y|Y N|N</poll>

<poll>ABE-0174108-positive? Y|Y N|N</poll>

<poll>ABE-0174108-negative? Y|Y N|N</poll>

dhaR (b1201)

<poll>ABE-0004033-regulator? Y|Y N|N</poll>

<poll>ABE-0004033-positive? Y|Y N|N</poll>

<poll>ABE-0004033-negative? Y|Y N|N</poll>

dicA (b1570)

<poll>ABE-0005248-regulator? Y|Y N|N</poll>

<poll>ABE-0005248-positive? Y|Y N|N</poll>

<poll>ABE-0005248-negative? Y|Y N|N</poll>

dicC (b1569)

<poll>ABE-0005244-regulator? Y|Y N|N</poll>

<poll>ABE-0005244-positive? Y|Y N|N</poll>

<poll>ABE-0005244-negative? Y|Y N|N</poll>

dos (b1489)

<poll>ABE-0004963-regulator? Y|Y N|N</poll>

<poll>ABE-0004963-positive? Y|Y N|N</poll>

<poll>ABE-0004963-negative? Y|Y N|N</poll>

dsdC (b2364)

<poll>ABE-0007797-regulator? Y|Y N|N</poll>

<poll>ABE-0007797-positive? Y|Y N|N</poll>

<poll>ABE-0007797-negative? Y|Y N|N</poll>

[[PMID:6090429[19]]][19]/>

ebgR (b3075)

<poll>ABE-0010099-regulator? Y|Y N|N</poll>

<poll>ABE-0010099-positive? Y|Y N|N</poll>

<poll>ABE-0010099-negative? Y|Y N|N</poll>

[[PMID:1107144[20]]][20]/>

emrR (b2684)

<poll>ABE-0008834-regulator? Y|Y N|N</poll>

<poll>ABE-0008834-positive? Y|Y N|N</poll>

<poll>ABE-0008834-negative? Y|Y N|N</poll>

envR (b3264)

<poll>ABE-0010712-regulator? Y|Y N|N</poll>

<poll>ABE-0010712-positive? Y|Y N|N</poll>

<poll>ABE-0010712-negative? Y|Y N|N</poll>

envY (b0566)

<poll>ABE-0001935-regulator? Y|Y N|N</poll>

<poll>ABE-0001935-positive? Y|Y N|N</poll>

<poll>ABE-0001935-negative? Y|Y N|N</poll>

evgA (b2369)

<poll>ABE-0007817-regulator? Y|Y N|N</poll>

<poll>ABE-0007817-positive? Y|Y N|N</poll>

<poll>ABE-0007817-negative? Y|Y N|N</poll>

evgS (b2370)

<poll>ABE-0007819-regulator? Y|Y N|N</poll>

<poll>ABE-0007819-positive? Y|Y N|N</poll>

<poll>ABE-0007819-negative? Y|Y N|N</poll>

exuR (b3094)

<poll>ABE-0010176-regulator? Y|Y N|N</poll>

<poll>ABE-0010176-positive? Y|Y N|N</poll>

<poll>ABE-0010176-negative? Y|Y N|N</poll>

fadR (b1187)

<poll>ABE-0003988-regulator? Y|Y N|N</poll>

<poll>ABE-0003988-positive? Y|Y N|N</poll>

<poll>ABE-0003988-negative? Y|Y N|N</poll>

farR (b0730)

<poll>ABE-0002487-regulator? Y|Y N|N</poll>

<poll>ABE-0002487-positive? Y|Y N|N</poll>

<poll>ABE-0002487-negative? Y|Y N|N</poll>

feaR (b1384)

<poll>ABE-0004630-regulator? Y|Y N|N</poll>

<poll>ABE-0004630-positive? Y|Y N|N</poll>

<poll>ABE-0004630-negative? Y|Y N|N</poll>

fecI (b4293)

<poll>ABE-0014072-regulator? Y|Y N|N</poll>

<poll>ABE-0014072-positive? Y|Y N|N</poll>

<poll>ABE-0014072-negative? Y|Y N|N</poll>

fhlA (b2731)

<poll>ABE-0008971-regulator? Y|Y N|N</poll>

<poll>ABE-0008971-positive? Y|Y N|N</poll>

<poll>ABE-0008971-negative? Y|Y N|N</poll>

fimB (b4312)

<poll>ABE-0014141-regulator? Y|Y N|N</poll>

<poll>ABE-0014141-positive? Y|Y N|N</poll>

<poll>ABE-0014141-negative? Y|Y N|N</poll>

fimE (b4313)

<poll>ABE-0014143-regulator? Y|Y N|N</poll>

<poll>ABE-0014143-positive? Y|Y N|N</poll>

<poll>ABE-0014143-negative? Y|Y N|N</poll>

fimZ (b0535)

<poll>ABE-0001836-regulator? Y|Y N|N</poll>

<poll>ABE-0001836-positive? Y|Y N|N</poll>

<poll>ABE-0001836-negative? Y|Y N|N</poll>

fis (b3261)

<poll>ABE-0010703-regulator? Y|Y N|N</poll>

<poll>ABE-0010703-positive? Y|Y N|N</poll>

<poll>ABE-0010703-negative? Y|Y N|N</poll>

flgM (b1071)

<poll>ABE-0003634-regulator? Y|Y N|N</poll>

<poll>ABE-0003634-positive? Y|Y N|N</poll>

<poll>ABE-0003634-negative? Y|Y N|N</poll>

flhC (b1891)

<poll>ABE-0006301-regulator? Y|Y N|N</poll>

<poll>ABE-0006301-positive? Y|Y N|N</poll>

<poll>ABE-0006301-negative? Y|Y N|N</poll>

fliA (b1922)

<poll>ABE-0006396-regulator? Y|Y N|N</poll>

<poll>ABE-0006396-positive? Y|Y N|N</poll>

<poll>ABE-0006396-negative? Y|Y N|N</poll>

[[PMID:7590326[21]]][21]/>

fnr (b1334)

<poll>ABE-0004475-regulator? Y|Y N|N</poll>

<poll>ABE-0004475-positive? Y|Y N|N</poll>

<poll>ABE-0004475-negative? Y|Y N|N</poll>

fruR (b0080)

<poll>ABE-0000299-regulator? Y|Y N|N</poll>

<poll>ABE-0000299-positive? Y|Y N|N</poll>

<poll>ABE-0000299-negative? Y|Y N|N</poll>

frvR (b3897)

<poll>ABE-0012720-regulator? Y|Y N|N</poll>

<poll>ABE-0012720-positive? Y|Y N|N</poll>

<poll>ABE-0012720-negative? Y|Y N|N</poll>

fucR (b2805)

<poll>ABE-0009195-regulator? Y|Y N|N</poll>

<poll>ABE-0009195-positive? Y|Y N|N</poll>

<poll>ABE-0009195-negative? Y|Y N|N</poll>

fur (b0683)

<poll>ABE-0002327-regulator? Y|Y N|N</poll>

<poll>ABE-0002327-positive? Y|Y N|N</poll>

<poll>ABE-0002327-negative? Y|Y N|N</poll>

galR (b2837)

<poll>ABE-0009307-regulator? Y|Y N|N</poll>

<poll>ABE-0009307-positive? Y|Y N|N</poll>

<poll>ABE-0009307-negative? Y|Y N|N</poll>

galS (b2151)

<poll>ABE-0007110-regulator? Y|Y N|N</poll>

<poll>ABE-0007110-positive? Y|Y N|N</poll>

<poll>ABE-0007110-negative? Y|Y N|N</poll>

gatR_1 (b2087)

<poll>ABE-0006914-regulator? Y|Y N|N</poll>

<poll>ABE-0006914-positive? Y|Y N|N</poll>

<poll>ABE-0006914-negative? Y|Y N|N</poll>

gatR_2 (b2090)

<poll>ABE-0006921-regulator? Y|Y N|N</poll>

<poll>ABE-0006921-positive? Y|Y N|N</poll>

<poll>ABE-0006921-negative? Y|Y N|N</poll>

gcvA (b2808)

<poll>ABE-0009202-regulator? Y|Y N|N</poll>

<poll>ABE-0009202-positive? Y|Y N|N</poll>

<poll>ABE-0009202-negative? Y|Y N|N</poll>

gcvR (b2479)

<poll>ABE-0008168-regulator? Y|Y N|N</poll>

<poll>ABE-0008168-positive? Y|Y N|N</poll>

<poll>ABE-0008168-negative? Y|Y N|N</poll>

glcC (b2980)

<poll>ABE-0009777-regulator? Y|Y N|N</poll>

<poll>ABE-0009777-positive? Y|Y N|N</poll>

<poll>ABE-0009777-negative? Y|Y N|N</poll>

glnB (b2553)

<poll>ABE-0008398-regulator? Y|Y N|N</poll>

<poll>ABE-0008398-positive? Y|Y N|N</poll>

<poll>ABE-0008398-negative? Y|Y N|N</poll>

glnG (b3868)

<poll>ABE-0012632-regulator? Y|Y N|N</poll>

<poll>ABE-0012632-positive? Y|Y N|N</poll>

<poll>ABE-0012632-negative? Y|Y N|N</poll>

glnK (b0450)

<poll>ABE-0001562-regulator? Y|Y N|N</poll>

<poll>ABE-0001562-positive? Y|Y N|N</poll>

<poll>ABE-0001562-negative? Y|Y N|N</poll>


edit table

H-S

Gene name (bnum)Is this a regulatorPos. regulator?Neg. regulator?CommentsEvidence

racR (b1356)

<poll>ABE-0004548-regulator? Y|Y N|N</poll>

<poll>ABE-0004548-positive? Y|Y N|N</poll>

<poll>ABE-0004548-negative? Y|Y N|N</poll>

putA (b1014)

<poll>ABE-0003424-regulator? Y|Y N|N</poll>

<poll>ABE-0003424-positive? Y|Y N|N</poll>

<poll>ABE-0003424-negative? Y|Y N|N</poll>

[[PMID:15155740[22]]][22]/>

rbsR (b3753)

<poll>ABE-0012271-regulator? Y|Y N|N</poll>

<poll>ABE-0012271-positive? Y|Y N|N</poll>

<poll>ABE-0012271-negative? Y|Y N|N</poll>

hdfR (b4480)

<poll>ABE-0174109-regulator? Y|Y N|N</poll>

<poll>ABE-0174109-positive? Y|Y N|N</poll>

<poll>ABE-0174109-negative? Y|Y N|N</poll>

lexA (b4043)

<poll>ABE-0013241-regulator? Y|Y N|N</poll>

<poll>ABE-0013241-positive? Y|Y N|N</poll>

<poll>ABE-0013241-negative? Y|Y N|N</poll>

[[PMID:7027255[23]]][23]/> [[PMID:7027256[24]]][24]/>

metJ (b3938)

<poll>ABE-0012874-regulator? Y|Y N|N</poll>

<poll>ABE-0012874-positive? Y|Y N|N</poll>

<poll>ABE-0012874-negative? Y|Y N|N</poll>

malT (b3418)

<poll>ABE-0011162-regulator? Y|Y N|N</poll>

<poll>ABE-0011162-positive? Y|Y N|N</poll>

<poll>ABE-0011162-negative? Y|Y N|N</poll>

nanR (b3226)

<poll>ABE-0010584-regulator? Y|Y N|N</poll>

<poll>ABE-0010584-positive? Y|Y N|N</poll>

<poll>ABE-0010584-negative? Y|Y N|N</poll>

rhaR (b3906)

<poll>ABE-0012747-regulator? Y|Y N|N</poll>

<poll>ABE-0012747-positive? Y|Y N|N</poll>

<poll>ABE-0012747-negative? Y|Y N|N</poll>

rhaS (b3905)

<poll>ABE-0012745-regulator? Y|Y N|N</poll>

<poll>ABE-0012745-positive? Y|Y N|N</poll>

<poll>ABE-0012745-negative? Y|Y N|N</poll>

luxS (b2687)

<poll>ABE-0008842-regulator? Y|Y N|N</poll>

<poll>ABE-0008842-positive? Y|Y N|N</poll>

<poll>ABE-0008842-negative? Y|Y N|N</poll>

purR (b1658)

<poll>ABE-0005545-regulator? Y|Y N|N</poll>

<poll>ABE-0005545-positive? Y|Y N|N</poll>

<poll>ABE-0005545-negative? Y|Y N|N</poll>

[[PMID:3058704[25]]][25]/>

rcsA (b1951)

<poll>ABE-0006482-regulator? Y|Y N|N</poll>

<poll>ABE-0006482-positive? Y|Y N|N</poll>

<poll>ABE-0006482-negative? Y|Y N|N</poll>

hcaR (b2537)

<poll>ABE-0008351-regulator? Y|Y N|N</poll>

<poll>ABE-0008351-positive? Y|Y N|N</poll>

<poll>ABE-0008351-negative? Y|Y N|N</poll>

rcsB (b2217)

<poll>ABE-0007333-regulator? Y|Y N|N</poll>

<poll>ABE-0007333-positive? Y|Y N|N</poll>

<poll>ABE-0007333-negative? Y|Y N|N</poll>

hepA (b0059)

<poll>ABE-0000198-regulator? Y|Y N|N</poll>

<poll>ABE-0000198-positive? Y|Y N|N</poll>

<poll>ABE-0000198-negative? Y|Y N|N</poll>

rcsC (b2218)

<poll>ABE-0007336-regulator? Y|Y N|N</poll>

<poll>ABE-0007336-positive? Y|Y N|N</poll>

<poll>ABE-0007336-negative? Y|Y N|N</poll>

hfq (b4172)

<poll>ABE-0013659-regulator? Y|Y N|N</poll>

<poll>ABE-0013659-positive? Y|Y N|N</poll>

<poll>ABE-0013659-negative? Y|Y N|N</poll>

relB (b1564)

<poll>ABE-0005224-regulator? Y|Y N|N</poll>

<poll>ABE-0005224-positive? Y|Y N|N</poll>

<poll>ABE-0005224-negative? Y|Y N|N</poll>

himA (b1712)

<poll>ABE-0005715-regulator? Y|Y N|N</poll>

<poll>ABE-0005715-positive? Y|Y N|N</poll>

<poll>ABE-0005715-negative? Y|Y N|N</poll>

relE (b1563)

<poll>ABE-0005221-regulator? Y|Y N|N</poll>

<poll>ABE-0005221-positive? Y|Y N|N</poll>

<poll>ABE-0005221-negative? Y|Y N|N</poll>

himD (b0912)

<poll>ABE-0003107-regulator? Y|Y N|N</poll>

<poll>ABE-0003107-positive? Y|Y N|N</poll>

<poll>ABE-0003107-negative? Y|Y N|N</poll>

rfaH (b3842)

<poll>ABE-0012553-regulator? Y|Y N|N</poll>

<poll>ABE-0012553-positive? Y|Y N|N</poll>

<poll>ABE-0012553-negative? Y|Y N|N</poll>

hipB (b1508)

<poll>ABE-0005024-regulator? Y|Y N|N</poll>

<poll>ABE-0005024-positive? Y|Y N|N</poll>

<poll>ABE-0005024-negative? Y|Y N|N</poll>

rho (b3783)

<poll>ABE-0012362-regulator? Y|Y N|N</poll>

<poll>ABE-0012362-positive? Y|Y N|N</poll>

<poll>ABE-0012362-negative? Y|Y N|N</poll>

pin (b1158)

<poll>ABE-0003888-regulator? Y|Y N|N</poll>

<poll>ABE-0003888-positive? Y|Y N|N</poll>

<poll>ABE-0003888-negative? Y|Y N|N</poll>

rnk (b0610)

<poll>ABE-0002104-regulator? Y|Y N|N</poll>

<poll>ABE-0002104-positive? Y|Y N|N</poll>

<poll>ABE-0002104-negative? Y|Y N|N</poll>

hnr (b1235)

<poll>ABE-0004147-regulator? Y|Y N|N</poll>

<poll>ABE-0004147-positive? Y|Y N|N</poll>

<poll>ABE-0004147-negative? Y|Y N|N</poll>

rob (b4396)

<poll>ABE-0014420-regulator? Y|Y N|N</poll>

<poll>ABE-0014420-positive? Y|Y N|N</poll>

<poll>ABE-0014420-negative? Y|Y N|N</poll>

hns (b1237)

<poll>ABE-0004152-regulator? Y|Y N|N</poll>

<poll>ABE-0004152-positive? Y|Y N|N</poll>

<poll>ABE-0004152-negative? Y|Y N|N</poll>

rpiR (b4089)

<poll>ABE-0013400-regulator? Y|Y N|N</poll>

<poll>ABE-0013400-positive? Y|Y N|N</poll>

<poll>ABE-0013400-negative? Y|Y N|N</poll>

hycA (b2725)

<poll>ABE-0008952-regulator? Y|Y N|N</poll>

<poll>ABE-0008952-positive? Y|Y N|N</poll>

<poll>ABE-0008952-negative? Y|Y N|N</poll>

rplD (b3319)

<poll>ABE-0010858-regulator? Y|Y N|N</poll>

<poll>ABE-0010858-positive? Y|Y N|N</poll>

<poll>ABE-0010858-negative? Y|Y N|N</poll>

hyfR (b2491)

<poll>ABE-0008204-regulator? Y|Y N|N</poll>

<poll>ABE-0008204-positive? Y|Y N|N</poll>

<poll>ABE-0008204-negative? Y|Y N|N</poll>

rpoD (b3067)

<poll>ABE-0010070-regulator? Y|Y N|N</poll>

<poll>ABE-0010070-positive? Y|Y N|N</poll>

<poll>ABE-0010070-negative? Y|Y N|N</poll>

iciA (b2916)

<poll>ABE-0009574-regulator? Y|Y N|N</poll>

<poll>ABE-0009574-positive? Y|Y N|N</poll>

<poll>ABE-0009574-negative? Y|Y N|N</poll>

rpoE (b2573)

<poll>ABE-0008467-regulator? Y|Y N|N</poll>

<poll>ABE-0008467-positive? Y|Y N|N</poll>

<poll>ABE-0008467-negative? Y|Y N|N</poll>

iclR (b4018)

<poll>ABE-0013136-regulator? Y|Y N|N</poll>

<poll>ABE-0013136-positive? Y|Y N|N</poll>

<poll>ABE-0013136-negative? Y|Y N|N</poll>

rpoH (b3461)

<poll>ABE-0011303-regulator? Y|Y N|N</poll>

<poll>ABE-0011303-positive? Y|Y N|N</poll>

<poll>ABE-0011303-negative? Y|Y N|N</poll>

idnR (b4264)

<poll>ABE-0013966-regulator? Y|Y N|N</poll>

<poll>ABE-0013966-positive? Y|Y N|N</poll>

<poll>ABE-0013966-negative? Y|Y N|N</poll>

rpoN (b3202)

<poll>ABE-0010514-regulator? Y|Y N|N</poll>

<poll>ABE-0010514-positive? Y|Y N|N</poll>

<poll>ABE-0010514-negative? Y|Y N|N</poll>

ilvY (b3773)

<poll>ABE-0012323-regulator? Y|Y N|N</poll>

<poll>ABE-0012323-positive? Y|Y N|N</poll>

<poll>ABE-0012323-negative? Y|Y N|N</poll>

rpoS (b2741)

<poll>ABE-0009001-regulator? Y|Y N|N</poll>

<poll>ABE-0009001-positive? Y|Y N|N</poll>

<poll>ABE-0009001-negative? Y|Y N|N</poll>

iscR (b2531)

<poll>ABE-0008326-regulator? Y|Y N|N</poll>

<poll>ABE-0008326-positive? Y|Y N|N</poll>

<poll>ABE-0008326-negative? Y|Y N|N</poll>

rpsD (b3296)

<poll>ABE-0010805-regulator? Y|Y N|N</poll>

<poll>ABE-0010805-positive? Y|Y N|N</poll>

<poll>ABE-0010805-negative? Y|Y N|N</poll>

kdgR (b1827)

<poll>ABE-0006081-regulator? Y|Y N|N</poll>

<poll>ABE-0006081-positive? Y|Y N|N</poll>

<poll>ABE-0006081-negative? Y|Y N|N</poll>

rrmB (b3289)

<poll>ABE-0010785-regulator? Y|Y N|N</poll>

<poll>ABE-0010785-positive? Y|Y N|N</poll>

<poll>ABE-0010785-negative? Y|Y N|N</poll>

kdpE (b0694)

<poll>ABE-0002366-regulator? Y|Y N|N</poll>

<poll>ABE-0002366-positive? Y|Y N|N</poll>

<poll>ABE-0002366-negative? Y|Y N|N</poll>

rsd (b3995)

<poll>ABE-0013059-regulator? Y|Y N|N</poll>

<poll>ABE-0013059-positive? Y|Y N|N</poll>

<poll>ABE-0013059-negative? Y|Y N|N</poll>

lacI (b0345)

<poll>ABE-0001189-regulator? Y|Y N|N</poll>

<poll>ABE-0001189-positive? Y|Y N|N</poll>

<poll>ABE-0001189-negative? Y|Y N|N</poll>

rstA (b1608)

<poll>ABE-0005370-regulator? Y|Y N|N</poll>

<poll>ABE-0005370-positive? Y|Y N|N</poll>

<poll>ABE-0005370-negative? Y|Y N|N</poll>

leuO (b0076)

<poll>ABE-0000280-regulator? Y|Y N|N</poll>

<poll>ABE-0000280-positive? Y|Y N|N</poll>

<poll>ABE-0000280-negative? Y|Y N|N</poll>

rtcR (b3422)

<poll>ABE-0011174-regulator? Y|Y N|N</poll>

<poll>ABE-0011174-positive? Y|Y N|N</poll>

<poll>ABE-0011174-negative? Y|Y N|N</poll>

lldR (b3604)

<poll>ABE-0011782-regulator? Y|Y N|N</poll>

<poll>ABE-0011782-positive? Y|Y N|N</poll>

<poll>ABE-0011782-negative? Y|Y N|N</poll>

sdiA (b1916)

<poll>ABE-0006381-regulator? Y|Y N|N</poll>

<poll>ABE-0006381-positive? Y|Y N|N</poll>

<poll>ABE-0006381-negative? Y|Y N|N</poll>

lrhA (b2289)

<poll>ABE-0007555-regulator? Y|Y N|N</poll>

<poll>ABE-0007555-positive? Y|Y N|N</poll>

<poll>ABE-0007555-negative? Y|Y N|N</poll>

sgcR (b4300)

<poll>ABE-0014094-regulator? Y|Y N|N</poll>

<poll>ABE-0014094-positive? Y|Y N|N</poll>

<poll>ABE-0014094-negative? Y|Y N|N</poll>

lrp (b0889)

<poll>ABE-0003023-regulator? Y|Y N|N</poll>

<poll>ABE-0003023-positive? Y|Y N|N</poll>

<poll>ABE-0003023-negative? Y|Y N|N</poll>

slyA (b1642)

<poll>ABE-0005495-regulator? Y|Y N|N</poll>

<poll>ABE-0005495-positive? Y|Y N|N</poll>

<poll>ABE-0005495-negative? Y|Y N|N</poll>

lsrR (b1512)

<poll>ABE-0005045-regulator? Y|Y N|N</poll>

<poll>ABE-0005045-positive? Y|Y N|N</poll>

<poll>ABE-0005045-negative? Y|Y N|N</poll>

soxR (b4063)

<poll>ABE-0013316-regulator? Y|Y N|N</poll>

<poll>ABE-0013316-positive? Y|Y N|N</poll>

<poll>ABE-0013316-negative? Y|Y N|N</poll>

lysR (b2839)

<poll>ABE-0009313-regulator? Y|Y N|N</poll>

<poll>ABE-0009313-positive? Y|Y N|N</poll>

<poll>ABE-0009313-negative? Y|Y N|N</poll>

soxS (b4062)

<poll>ABE-0013311-regulator? Y|Y N|N</poll>

<poll>ABE-0013311-positive? Y|Y N|N</poll>

<poll>ABE-0013311-negative? Y|Y N|N</poll>

malI (b1620)

<poll>ABE-0005421-regulator? Y|Y N|N</poll>

<poll>ABE-0005421-positive? Y|Y N|N</poll>

<poll>ABE-0005421-negative? Y|Y N|N</poll>

srlR (b2707)

<poll>ABE-0008900-regulator? Y|Y N|N</poll>

<poll>ABE-0008900-positive? Y|Y N|N</poll>

<poll>ABE-0008900-negative? Y|Y N|N</poll>

malY (b1622)

<poll>ABE-0005432-regulator? Y|Y N|N</poll>

<poll>ABE-0005432-positive? Y|Y N|N</poll>

<poll>ABE-0005432-negative? Y|Y N|N</poll>

stpA (b2669)

<poll>ABE-0008788-regulator? Y|Y N|N</poll>

<poll>ABE-0008788-positive? Y|Y N|N</poll>

<poll>ABE-0008788-negative? Y|Y N|N</poll>

marA (b1531)

<poll>ABE-0005112-regulator? Y|Y N|N</poll>

<poll>ABE-0005112-positive? Y|Y N|N</poll>

<poll>ABE-0005112-negative? Y|Y N|N</poll>

marR (b1530)

<poll>ABE-0005110-regulator? Y|Y N|N</poll>

<poll>ABE-0005110-positive? Y|Y N|N</poll>

<poll>ABE-0005110-negative? Y|Y N|N</poll>

melR (b4118)

<poll>ABE-0013486-regulator? Y|Y N|N</poll>

<poll>ABE-0013486-positive? Y|Y N|N</poll>

<poll>ABE-0013486-negative? Y|Y N|N</poll>

metR (b3828)

<poll>ABE-0012506-regulator? Y|Y N|N</poll>

<poll>ABE-0012506-positive? Y|Y N|N</poll>

<poll>ABE-0012506-negative? Y|Y N|N</poll>

mhpR (b0346)

<poll>ABE-0001191-regulator? Y|Y N|N</poll>

<poll>ABE-0001191-positive? Y|Y N|N</poll>

<poll>ABE-0001191-negative? Y|Y N|N</poll>

mlc (b1594)

<poll>ABE-0005323-regulator? Y|Y N|N</poll>

<poll>ABE-0005323-positive? Y|Y N|N</poll>

<poll>ABE-0005323-negative? Y|Y N|N</poll>

mntR (b0817)

<poll>ABE-0002793-regulator? Y|Y N|N</poll>

<poll>ABE-0002793-positive? Y|Y N|N</poll>

<poll>ABE-0002793-negative? Y|Y N|N</poll>

modE (b0761)

<poll>ABE-0002585-regulator? Y|Y N|N</poll>

<poll>ABE-0002585-positive? Y|Y N|N</poll>

<poll>ABE-0002585-negative? Y|Y N|N</poll>

mtlR (b3601)

<poll>ABE-0011769-regulator? Y|Y N|N</poll>

<poll>ABE-0011769-positive? Y|Y N|N</poll>

<poll>ABE-0011769-negative? Y|Y N|N</poll>

nac (b1988)

<poll>ABE-0006594-regulator? Y|Y N|N</poll>

<poll>ABE-0006594-positive? Y|Y N|N</poll>

<poll>ABE-0006594-negative? Y|Y N|N</poll>

nadR (b4390)

<poll>ABE-0014397-regulator? Y|Y N|N</poll>

<poll>ABE-0014397-positive? Y|Y N|N</poll>

<poll>ABE-0014397-negative? Y|Y N|N</poll>

nagC (b0676)

<poll>ABE-0002299-regulator? Y|Y N|N</poll>

<poll>ABE-0002299-positive? Y|Y N|N</poll>

<poll>ABE-0002299-negative? Y|Y N|N</poll>

narL (b1221)

<poll>ABE-0004097-regulator? Y|Y N|N</poll>

<poll>ABE-0004097-positive? Y|Y N|N</poll>

<poll>ABE-0004097-negative? Y|Y N|N</poll>

narP (b2193)

<poll>ABE-0007259-regulator? Y|Y N|N</poll>

<poll>ABE-0007259-positive? Y|Y N|N</poll>

<poll>ABE-0007259-negative? Y|Y N|N</poll>

nhaR (b0020)

<poll>ABE-0000072-regulator? Y|Y N|N</poll>

<poll>ABE-0000072-positive? Y|Y N|N</poll>

<poll>ABE-0000072-negative? Y|Y N|N</poll>

nikR (b3481)

<poll>ABE-0011366-regulator? Y|Y N|N</poll>

<poll>ABE-0011366-positive? Y|Y N|N</poll>

<poll>ABE-0011366-negative? Y|Y N|N</poll>

nlp (b3188)

<poll>ABE-0010477-regulator? Y|Y N|N</poll>

<poll>ABE-0010477-positive? Y|Y N|N</poll>

<poll>ABE-0010477-negative? Y|Y N|N</poll>

A predicted txn factor based on amino acid sequence similarity to the family of Lambda repressor-like, DNA-binding proteins (IPR010982). It's biological function is not clear. When present in multicopy, nlp (aka sfsB) allows a ∆cya crp*1 strain, but not a ∆cya crp+ strain, to ferment maltose [26]. A total of 12 genes with this phenotype were isolated [27].

nusA (b3169)

<poll>ABE-0010413-regulator? Y|Y N|N</poll>

<poll>ABE-0010413-positive? Y|Y N|N</poll>

<poll>ABE-0010413-negative? Y|Y N|N</poll>

nusB (b0416)

<poll>ABE-0001447-regulator? Y|Y N|N</poll>

<poll>ABE-0001447-positive? Y|Y N|N</poll>

<poll>ABE-0001447-negative? Y|Y N|N</poll>

nusG (b3982)

<poll>ABE-0013026-regulator? Y|Y N|N</poll>

<poll>ABE-0013026-positive? Y|Y N|N</poll>

<poll>ABE-0013026-negative? Y|Y N|N</poll>

ogrK (b2082)

<poll>ABE-0006893-regulator? Y|Y N|N</poll>

<poll>ABE-0006893-positive? Y|Y N|N</poll>

<poll>ABE-0006893-negative? Y|Y N|N</poll>

ompR (b3405)

<poll>ABE-0011110-regulator? Y|Y N|N</poll>

<poll>ABE-0011110-positive? Y|Y N|N</poll>

<poll>ABE-0011110-negative? Y|Y N|N</poll>

oxyR (b3961)

<poll>ABE-0012973-regulator? Y|Y N|N</poll>

<poll>ABE-0012973-positive? Y|Y N|N</poll>

<poll>ABE-0012973-negative? Y|Y N|N</poll>

paaX (b1399)

<poll>ABE-0004674-regulator? Y|Y N|N</poll>

<poll>ABE-0004674-positive? Y|Y N|N</poll>

<poll>ABE-0004674-negative? Y|Y N|N</poll>

pdhR (b0113)

<poll>ABE-0000394-regulator? Y|Y N|N</poll>

<poll>ABE-0000394-positive? Y|Y N|N</poll>

<poll>ABE-0000394-negative? Y|Y N|N</poll>

perR (b0254)

<poll>ABE-0000862-regulator? Y|Y N|N</poll>

<poll>ABE-0000862-positive? Y|Y N|N</poll>

<poll>ABE-0000862-negative? Y|Y N|N</poll>

phnF (b4102)

<poll>ABE-0013435-regulator? Y|Y N|N</poll>

<poll>ABE-0013435-positive? Y|Y N|N</poll>

<poll>ABE-0013435-negative? Y|Y N|N</poll>

phoB (b0399)

<poll>ABE-0001389-regulator? Y|Y N|N</poll>

<poll>ABE-0001389-positive? Y|Y N|N</poll>

<poll>ABE-0001389-negative? Y|Y N|N</poll>

phoP (b1130)

<poll>ABE-0003807-regulator? Y|Y N|N</poll>

<poll>ABE-0003807-positive? Y|Y N|N</poll>

<poll>ABE-0003807-negative? Y|Y N|N</poll>

prpR (b0330)

<poll>ABE-0001133-regulator? Y|Y N|N</poll>

<poll>ABE-0001133-positive? Y|Y N|N</poll>

<poll>ABE-0001133-negative? Y|Y N|N</poll>

pspC (b1306)

<poll>ABE-0004391-regulator? Y|Y N|N</poll>

<poll>ABE-0004391-positive? Y|Y N|N</poll>

<poll>ABE-0004391-negative? Y|Y N|N</poll>

pspF (b1303)

<poll>ABE-0004383-regulator? Y|Y N|N</poll>

<poll>ABE-0004383-positive? Y|Y N|N</poll>

<poll>ABE-0004383-negative? Y|Y N|N</poll>

qseB (b3025)

<poll>ABE-0009936-regulator? Y|Y N|N</poll>

<poll>ABE-0009936-positive? Y|Y N|N</poll>

<poll>ABE-0009936-negative? Y|Y N|N</poll>

pcnB (b0143)

<poll>ABE-0000493-regulator? Y|Y N|N</poll>

<poll>ABE-0000493-positive? Y|Y N|N</poll>

<poll>ABE-0000493-negative? Y|Y N|N</poll>

poly(A) polymerase I

[[PMID:1438224[28]]][28]/>

rpoA (b3295)

<poll>ABE-0010802-regulator? Y|Y N|N</poll>

<poll>ABE-0010802-positive? Y|Y N|N</poll>

<poll>ABE-0010802-negative? Y|Y N|N</poll>

rpoB (b3987)

<poll>ABE-0013041-regulator? Y|Y N|N</poll>

<poll>ABE-0013041-positive? Y|Y N|N</poll>

<poll>ABE-0013041-negative? Y|Y N|N</poll>

rpoC (b3988)

<poll>ABE-0013043-regulator? Y|Y N|N</poll>

<poll>ABE-0013043-positive? Y|Y N|N</poll>

<poll>ABE-0013043-negative? Y|Y N|N</poll>

rpoZ (b3649)

<poll>ABE-0011933-regulator? Y|Y N|N</poll>

<poll>ABE-0011933-positive? Y|Y N|N</poll>

<poll>ABE-0011933-negative? Y|Y N|N</poll>

rcnR (b2105)

<poll>ABE-0006964-regulator?rnY|YrnN|N</poll>

<poll>ABE-0006964-positive?rnY|YrnN|N</poll>

<poll>ABE-0006964-negative?rnY|YrnN|N</poll>

Formerly yohL

[[PMID:16956381[29]]][29]/>

edit table

T-Z

Gene name (bnum)Is this a regulatorPos. regulator?Neg. regulator?CommentsEvidence

treR (b4241)

<poll>ABE-0013875-regulator? Y|Y N|N</poll>

<poll>ABE-0013875-positive? Y|Y N|N</poll>

<poll>ABE-0013875-negative? Y|Y N|N</poll>

PMID:9148912[30]

wrbA (b1004)

<poll>ABE-0003392-regulator? Y|Y N|N</poll>

<poll>ABE-0003392-positive? Y|Y N|N</poll>

<poll>ABE-0003392-negative? Y|Y N|N</poll>

WrbA binds to TrpR, but doesn't affect affinity of TrpR for it's operator site.

PMID:9694845[31]

ycdC (b1013)

<poll>ABE-0003422-regulator? Y|Y N|N</poll>

<poll>ABE-0003422-positive? Y|Y N|N</poll>

<poll>ABE-0003422-negative? Y|Y N|N</poll>

trpR (b4393)

<poll>ABE-0014408-regulator? Y|Y N|N</poll>

<poll>ABE-0014408-positive? Y|Y N|N</poll>

<poll>ABE-0014408-negative? Y|Y N|N</poll>

yjfQ (b4191)

<poll>ABE-0013713-regulator? Y|Y N|N</poll>

<poll>ABE-0013713-positive? Y|Y N|N</poll>

<poll>ABE-0013713-negative? Y|Y N|N</poll>

umuD (b1183)

<poll>ABE-0003974-regulator? Y|Y N|N</poll>

<poll>ABE-0003974-positive? Y|Y N|N</poll>

<poll>ABE-0003974-negative? Y|Y N|N</poll>

ygaV (b2667)

<poll>ABE-0008784-regulator? Y|Y N|N</poll>

<poll>ABE-0008784-positive? Y|Y N|N</poll>

<poll>ABE-0008784-negative? Y|Y N|N</poll>

ygeK (b2856)

<poll>ABE-0009381-regulator? Y|Y N|N</poll>

<poll>ABE-0009381-positive? Y|Y N|N</poll>

<poll>ABE-0009381-negative? Y|Y N|N</poll>

tdcA (b3118)

<poll>ABE-0010252-regulator? Y|Y N|N</poll>

<poll>ABE-0010252-positive? Y|Y N|N</poll>

<poll>ABE-0010252-negative? Y|Y N|N</poll>

PMID:8413189[32]

tdcR (b3119)

<poll>ABE-0010255-regulator? Y|Y N|N</poll>

<poll>ABE-0010255-positive? Y|Y N|N</poll>

<poll>ABE-0010255-negative? Y|Y N|N</poll>

torR (b0995)

<poll>ABE-0003362-regulator? Y|Y N|N</poll>

<poll>ABE-0003362-positive? Y|Y N|N</poll>

<poll>ABE-0003362-negative? Y|Y N|N</poll>

torS (b0993)

<poll>ABE-0003354-regulator? Y|Y N|N</poll>

<poll>ABE-0003354-positive? Y|Y N|N</poll>

<poll>ABE-0003354-negative? Y|Y N|N</poll>

ttk (b3641)

<poll>ABE-0011902-regulator? Y|Y N|N</poll>

<poll>ABE-0011902-positive? Y|Y N|N</poll>

<poll>ABE-0011902-negative? Y|Y N|N</poll>

tyrR (b1323)

<poll>ABE-0004440-regulator? Y|Y N|N</poll>

<poll>ABE-0004440-positive? Y|Y N|N</poll>

<poll>ABE-0004440-negative? Y|Y N|N</poll>

uhpA (b3669)

<poll>ABE-0011995-regulator? Y|Y N|N</poll>

<poll>ABE-0011995-positive? Y|Y N|N</poll>

<poll>ABE-0011995-negative? Y|Y N|N</poll>

uidR (b1618)

<poll>ABE-0005415-regulator? Y|Y N|N</poll>

<poll>ABE-0005415-positive? Y|Y N|N</poll>

<poll>ABE-0005415-negative? Y|Y N|N</poll>

uvrY (b1914)

<poll>ABE-0006373-regulator? Y|Y N|N</poll>

<poll>ABE-0006373-positive? Y|Y N|N</poll>

<poll>ABE-0006373-negative? Y|Y N|N</poll>

uxuR (b4324)

<poll>ABE-0014179-regulator? Y|Y N|N</poll>

<poll>ABE-0014179-positive? Y|Y N|N</poll>

<poll>ABE-0014179-negative? Y|Y N|N</poll>

xapR (b2405)

<poll>ABE-0007922-regulator? Y|Y N|N</poll>

<poll>ABE-0007922-positive? Y|Y N|N</poll>

<poll>ABE-0007922-negative? Y|Y N|N</poll>

PMID:7559336[33]

xylR (b3569)

<poll>ABE-0011652-regulator? Y|Y N|N</poll>

<poll>ABE-0011652-positive? Y|Y N|N</poll>

<poll>ABE-0011652-negative? Y|Y N|N</poll>

yafC (b0208)

<poll>ABE-0000694-regulator? Y|Y N|N</poll>

<poll>ABE-0000694-positive? Y|Y N|N</poll>

<poll>ABE-0000694-negative? Y|Y N|N</poll>

yafY (b0251)

<poll>ABE-0000853-regulator? Y|Y N|N</poll>

<poll>ABE-0000853-positive? Y|Y N|N</poll>

<poll>ABE-0000853-negative? Y|Y N|N</poll>

yagI (b0272)

<poll>ABE-0000933-regulator? Y|Y N|N</poll>

<poll>ABE-0000933-positive? Y|Y N|N</poll>

<poll>ABE-0000933-negative? Y|Y N|N</poll>

yahA (b0315)

<poll>ABE-0001086-regulator? Y|Y N|N</poll>

<poll>ABE-0001086-positive? Y|Y N|N</poll>

<poll>ABE-0001086-negative? Y|Y N|N</poll>

yahB (b0316)

<poll>ABE-0001088-regulator? Y|Y N|N</poll>

<poll>ABE-0001088-positive? Y|Y N|N</poll>

<poll>ABE-0001088-negative? Y|Y N|N</poll>

Hypothetical LysR-Type Transcriptional Regulator based on COGs

ybaD (b0413)

<poll>ABE-0001437-regulator? Y|Y N|N</poll>

<poll>ABE-0001437-positive? Y|Y N|N</poll>

<poll>ABE-0001437-negative? Y|Y N|N</poll>

ybaK (b0481)

<poll>ABE-0001670-regulator? Y|Y N|N</poll>

<poll>ABE-0001670-positive? Y|Y N|N</poll>

<poll>ABE-0001670-negative? Y|Y N|N</poll>

ybaO (b0447)

<poll>ABE-0001553-regulator? Y|Y N|N</poll>

<poll>ABE-0001553-positive? Y|Y N|N</poll>

<poll>ABE-0001553-negative? Y|Y N|N</poll>

ybaQ (b0483)

<poll>ABE-0001677-regulator? Y|Y N|N</poll>

<poll>ABE-0001677-positive? Y|Y N|N</poll>

<poll>ABE-0001677-negative? Y|Y N|N</poll>

ybbS (b0504)

<poll>ABE-0001742-regulator? Y|Y N|N</poll>

<poll>ABE-0001742-positive? Y|Y N|N</poll>

<poll>ABE-0001742-negative? Y|Y N|N</poll>

ybcM (b0546)

<poll>ABE-0001871-regulator? Y|Y N|N</poll>

<poll>ABE-0001871-positive? Y|Y N|N</poll>

<poll>ABE-0001871-negative? Y|Y N|N</poll>

ybcQ (b0551)

<poll>ABE-0001883-regulator? Y|Y N|N</poll>

<poll>ABE-0001883-positive? Y|Y N|N</poll>

<poll>ABE-0001883-negative? Y|Y N|N</poll>

ybdO (b0603)

<poll>ABE-0002077-regulator? Y|Y N|N</poll>

<poll>ABE-0002077-positive? Y|Y N|N</poll>

<poll>ABE-0002077-negative? Y|Y N|N</poll>

ybeF (b0629)

<poll>ABE-0002158-regulator? Y|Y N|N</poll>

<poll>ABE-0002158-positive? Y|Y N|N</poll>

<poll>ABE-0002158-negative? Y|Y N|N</poll>

ybhD (b0768)

<poll>ABE-0002613-regulator? Y|Y N|N</poll>

<poll>ABE-0002613-positive? Y|Y N|N</poll>

<poll>ABE-0002613-negative? Y|Y N|N</poll>

ybiH (b0796)

<poll>ABE-0002711-regulator? Y|Y N|N</poll>

<poll>ABE-0002711-positive? Y|Y N|N</poll>

<poll>ABE-0002711-negative? Y|Y N|N</poll>

ybjK (b0846)

<poll>ABE-0002885-regulator? Y|Y N|N</poll>

<poll>ABE-0002885-positive? Y|Y N|N</poll>

<poll>ABE-0002885-negative? Y|Y N|N</poll>

ycaN (b0900)

<poll>ABE-0003060-regulator? Y|Y N|N</poll>

<poll>ABE-0003060-positive? Y|Y N|N</poll>

<poll>ABE-0003060-negative? Y|Y N|N</poll>

Hypothetical LysR-Type Transcriptional Regulator based on COGs

ycfQ (b1111)

<poll>ABE-0003754-regulator? Y|Y N|N</poll>

<poll>ABE-0003754-positive? Y|Y N|N</poll>

<poll>ABE-0003754-negative? Y|Y N|N</poll>

ycgE (b1162)

<poll>ABE-0003900-regulator? Y|Y N|N</poll>

<poll>ABE-0003900-positive? Y|Y N|N</poll>

<poll>ABE-0003900-negative? Y|Y N|N</poll>

yciT (b1284)

<poll>ABE-0004312-regulator? Y|Y N|N</poll>

<poll>ABE-0004312-positive? Y|Y N|N</poll>

<poll>ABE-0004312-negative? Y|Y N|N</poll>

ycjC (b1299)

<poll>ABE-0004371-regulator? Y|Y N|N</poll>

<poll>ABE-0004371-positive? Y|Y N|N</poll>

<poll>ABE-0004371-negative? Y|Y N|N</poll>

ycjW (b1320)

<poll>ABE-0004428-regulator? Y|Y N|N</poll>

<poll>ABE-0004428-positive? Y|Y N|N</poll>

<poll>ABE-0004428-negative? Y|Y N|N</poll>

ycjZ (b1328)

<poll>ABE-0004457-regulator? Y|Y N|N</poll>

<poll>ABE-0004457-positive? Y|Y N|N</poll>

<poll>ABE-0004457-negative? Y|Y N|N</poll>

Hypothetical LysR-Type Transcriptional Regulator based on COGs

ydaM (b1341)

<poll>ABE-0004504-regulator? Y|Y N|N</poll>

<poll>ABE-0004504-positive? Y|Y N|N</poll>

<poll>ABE-0004504-negative? Y|Y N|N</poll>

ydcI (b1422)

<poll>ABE-0004746-regulator? Y|Y N|N</poll>

<poll>ABE-0004746-positive? Y|Y N|N</poll>

<poll>ABE-0004746-negative? Y|Y N|N</poll>

Hypothetical LysR-Type Transcriptional Regulator based on COGs

ydcN (b1434)

<poll>ABE-0004783-regulator? Y|Y N|N</poll>

<poll>ABE-0004783-positive? Y|Y N|N</poll>

<poll>ABE-0004783-negative? Y|Y N|N</poll>

ydcQ (b1438)

<poll>ABE-0004796-regulator? Y|Y N|N</poll>

<poll>ABE-0004796-positive? Y|Y N|N</poll>

<poll>ABE-0004796-negative? Y|Y N|N</poll>

ydcR (b1439)

<poll>ABE-0004800-regulator? Y|Y N|N</poll>

<poll>ABE-0004800-positive? Y|Y N|N</poll>

<poll>ABE-0004800-negative? Y|Y N|N</poll>

yddM (b1477)

<poll>ABE-0004925-regulator? Y|Y N|N</poll>

<poll>ABE-0004925-positive? Y|Y N|N</poll>

<poll>ABE-0004925-negative? Y|Y N|N</poll>

ydeO (b1499)

<poll>ABE-0004992-regulator? Y|Y N|N</poll>

<poll>ABE-0004992-positive? Y|Y N|N</poll>

<poll>ABE-0004992-negative? Y|Y N|N</poll>

ydfH (b1540)

<poll>ABE-0005144-regulator? Y|Y N|N</poll>

<poll>ABE-0005144-positive? Y|Y N|N</poll>

<poll>ABE-0005144-negative? Y|Y N|N</poll>

ydfT (b1559)

<poll>ABE-0005207-regulator? Y|Y N|N</poll>

<poll>ABE-0005207-positive? Y|Y N|N</poll>

<poll>ABE-0005207-negative? Y|Y N|N</poll>

ydhB (b1659)

<poll>ABE-0005547-regulator? Y|Y N|N</poll>

<poll>ABE-0005547-positive? Y|Y N|N</poll>

<poll>ABE-0005547-negative? Y|Y N|N</poll>

Hypothetical LysR-Type Transcriptional Regulator based on COGs

ydhM (b1649)

<poll>ABE-0005514-regulator? Y|Y N|N</poll>

<poll>ABE-0005514-positive? Y|Y N|N</poll>

<poll>ABE-0005514-negative? Y|Y N|N</poll>

ydiP (b1696)

<poll>ABE-0005660-regulator? Y|Y N|N</poll>

<poll>ABE-0005660-positive? Y|Y N|N</poll>

<poll>ABE-0005660-negative? Y|Y N|N</poll>

ydjF (b1770)

<poll>ABE-0005897-regulator? Y|Y N|N</poll>

<poll>ABE-0005897-positive? Y|Y N|N</poll>

<poll>ABE-0005897-negative? Y|Y N|N</poll>

yeaM (b1790)

<poll>ABE-0005956-regulator? Y|Y N|N</poll>

<poll>ABE-0005956-positive? Y|Y N|N</poll>

<poll>ABE-0005956-negative? Y|Y N|N</poll>

yeaT (b1799)

<poll>ABE-0005987-regulator? Y|Y N|N</poll>

<poll>ABE-0005987-positive? Y|Y N|N</poll>

<poll>ABE-0005987-negative? Y|Y N|N</poll>

Hypothetical LysR-Type Transcriptional Regulator based on COGs

yebK (b1853)

<poll>ABE-0006179-regulator? Y|Y N|N</poll>

<poll>ABE-0006179-positive? Y|Y N|N</poll>

<poll>ABE-0006179-negative? Y|Y N|N</poll>

yedW (b1969)

<poll>ABE-0006533-regulator? Y|Y N|N</poll>

<poll>ABE-0006533-positive? Y|Y N|N</poll>

<poll>ABE-0006533-negative? Y|Y N|N</poll>

yeeY (b2015)

<poll>ABE-0006700-regulator? Y|Y N|N</poll>

<poll>ABE-0006700-positive? Y|Y N|N</poll>

<poll>ABE-0006700-negative? Y|Y N|N</poll>

yegE (b2067)

<poll>ABE-0006845-regulator? Y|Y N|N</poll>

<poll>ABE-0006845-positive? Y|Y N|N</poll>

<poll>ABE-0006845-negative? Y|Y N|N</poll>

yegW (b2101)

<poll>ABE-0006952-regulator? Y|Y N|N</poll>

<poll>ABE-0006952-positive? Y|Y N|N</poll>

<poll>ABE-0006952-negative? Y|Y N|N</poll>

yehT (b2125)

<poll>ABE-0007023-regulator? Y|Y N|N</poll>

<poll>ABE-0007023-positive? Y|Y N|N</poll>

<poll>ABE-0007023-negative? Y|Y N|N</poll>

yehV (b2127)

<poll>ABE-0007030-regulator? Y|Y N|N</poll>

<poll>ABE-0007030-positive? Y|Y N|N</poll>

<poll>ABE-0007030-negative? Y|Y N|N</poll>

yeiE (b2157)

<poll>ABE-0007138-regulator? Y|Y N|N</poll>

<poll>ABE-0007138-positive? Y|Y N|N</poll>

<poll>ABE-0007138-negative? Y|Y N|N</poll>

PMID:1240070[34]

yeiL (b2163)

<poll>ABE-0007160-regulator? Y|Y N|N</poll>

<poll>ABE-0007160-positive? Y|Y N|N</poll>

<poll>ABE-0007160-negative? Y|Y N|N</poll>

yfaX (b2248)

<poll>ABE-0007438-regulator? Y|Y N|N</poll>

<poll>ABE-0007438-positive? Y|Y N|N</poll>

<poll>ABE-0007438-negative? Y|Y N|N</poll>

yfeG (b2437)

<poll>ABE-0008036-regulator? Y|Y N|N</poll>

<poll>ABE-0008036-positive? Y|Y N|N</poll>

<poll>ABE-0008036-negative? Y|Y N|N</poll>

yfeR (b2409)

<poll>ABE-0007932-regulator? Y|Y N|N</poll>

<poll>ABE-0007932-positive? Y|Y N|N</poll>

<poll>ABE-0007932-negative? Y|Y N|N</poll>

yfeT (b2427)

<poll>ABE-0008000-regulator? Y|Y N|N</poll>

<poll>ABE-0008000-positive? Y|Y N|N</poll>

<poll>ABE-0008000-negative? Y|Y N|N</poll>

yfgA (b2516)

<poll>ABE-0008283-regulator? Y|Y N|N</poll>

<poll>ABE-0008283-positive? Y|Y N|N</poll>

<poll>ABE-0008283-negative? Y|Y N|N</poll>

yfhA (b2554)

<poll>ABE-0008400-regulator? Y|Y N|N</poll>

<poll>ABE-0008400-positive? Y|Y N|N</poll>

<poll>ABE-0008400-negative? Y|Y N|N</poll>

yfhH (b2561)

<poll>ABE-0008428-regulator? Y|Y N|N</poll>

<poll>ABE-0008428-positive? Y|Y N|N</poll>

<poll>ABE-0008428-negative? Y|Y N|N</poll>

yfiE (b2577)

<poll>ABE-0008483-regulator? Y|Y N|N</poll>

<poll>ABE-0008483-positive? Y|Y N|N</poll>

<poll>ABE-0008483-negative? Y|Y N|N</poll>

yfjR (b2634)

<poll>ABE-0008676-regulator? Y|Y N|N</poll>

<poll>ABE-0008676-positive? Y|Y N|N</poll>

<poll>ABE-0008676-negative? Y|Y N|N</poll>

ygaA (b2709)

<poll>ABE-0008904-regulator? Y|Y N|N</poll>

<poll>ABE-0008904-positive? Y|Y N|N</poll>

<poll>ABE-0008904-negative? Y|Y N|N</poll>

ygaE (b2664)

<poll>ABE-0008765-regulator? Y|Y N|N</poll>

<poll>ABE-0008765-positive? Y|Y N|N</poll>

<poll>ABE-0008765-negative? Y|Y N|N</poll>

ygbI (b2735)

<poll>ABE-0008982-regulator? Y|Y N|N</poll>

<poll>ABE-0008982-positive? Y|Y N|N</poll>

<poll>ABE-0008982-negative? Y|Y N|N</poll>

ygeH (b2852)

<poll>ABE-0009368-regulator? Y|Y N|N</poll>

<poll>ABE-0009368-positive? Y|Y N|N</poll>

<poll>ABE-0009368-negative? Y|Y N|N</poll>

ygeK (b2855)

<poll>ABE-0009379-regulator? Y|Y N|N</poll>

<poll>ABE-0009379-positive? Y|Y N|N</poll>

<poll>ABE-0009379-negative? Y|Y N|N</poll>

ygeV (b2869)

<poll>ABE-0009420-regulator? Y|Y N|N</poll>

<poll>ABE-0009420-positive? Y|Y N|N</poll>

<poll>ABE-0009420-negative? Y|Y N|N</poll>

ygfI (b2921)

<poll>ABE-0009585-regulator? Y|Y N|N</poll>

<poll>ABE-0009585-positive? Y|Y N|N</poll>

<poll>ABE-0009585-negative? Y|Y N|N</poll>

ygiP (b3060)

<poll>ABE-0010045-regulator? Y|Y N|N</poll>

<poll>ABE-0010045-positive? Y|Y N|N</poll>

<poll>ABE-0010045-negative? Y|Y N|N</poll>

ygiT (b3021)

<poll>ABE-0009923-regulator? Y|Y N|N</poll>

<poll>ABE-0009923-positive? Y|Y N|N</poll>

<poll>ABE-0009923-negative? Y|Y N|N</poll>

ygjM (b3082)

<poll>ABE-0010126-regulator? Y|Y N|N</poll>

<poll>ABE-0010126-positive? Y|Y N|N</poll>

<poll>ABE-0010126-negative? Y|Y N|N</poll>

yhaJ (b3105)

<poll>ABE-0010213-regulator? Y|Y N|N</poll>

<poll>ABE-0010213-positive? Y|Y N|N</poll>

<poll>ABE-0010213-negative? Y|Y N|N</poll>

yhfR (b3375)

<poll>ABE-0011031-regulator? Y|Y N|N</poll>

<poll>ABE-0011031-positive? Y|Y N|N</poll>

<poll>ABE-0011031-negative? Y|Y N|N</poll>

yhiE (b3512)

<poll>ABE-0011475-regulator? Y|Y N|N</poll>

<poll>ABE-0011475-positive? Y|Y N|N</poll>

<poll>ABE-0011475-negative? Y|Y N|N</poll>

yhiF (b3507)

<poll>ABE-0011454-regulator? Y|Y N|N</poll>

<poll>ABE-0011454-positive? Y|Y N|N</poll>

<poll>ABE-0011454-negative? Y|Y N|N</poll>

yhiH (b3486)

<poll>ABE-0011381-regulator? Y|Y N|N</poll>

<poll>ABE-0011381-positive? Y|Y N|N</poll>

<poll>ABE-0011381-negative? Y|Y N|N</poll>

yhiW (b3515)

<poll>ABE-0011482-regulator? Y|Y N|N</poll>

<poll>ABE-0011482-positive? Y|Y N|N</poll>

<poll>ABE-0011482-negative? Y|Y N|N</poll>

yhiX (b3516)

<poll>ABE-0011487-regulator? Y|Y N|N</poll>

<poll>ABE-0011487-positive? Y|Y N|N</poll>

<poll>ABE-0011487-negative? Y|Y N|N</poll>

Gene has been renamed gadX.

PMID:12446650[35]

yhjB (b3520)

<poll>ABE-0011499-regulator? Y|Y N|N</poll>

<poll>ABE-0011499-positive? Y|Y N|N</poll>

<poll>ABE-0011499-negative? Y|Y N|N</poll>

yhjC (b3521)

<poll>ABE-0011503-regulator? Y|Y N|N</poll>

<poll>ABE-0011503-positive? Y|Y N|N</poll>

<poll>ABE-0011503-negative? Y|Y N|N</poll>

yiaG (b3555)

<poll>ABE-0011612-regulator? Y|Y N|N</poll>

<poll>ABE-0011612-positive? Y|Y N|N</poll>

<poll>ABE-0011612-negative? Y|Y N|N</poll>

yiaJ (b3574)

<poll>ABE-0011677-regulator? Y|Y N|N</poll>

<poll>ABE-0011677-positive? Y|Y N|N</poll>

<poll>ABE-0011677-negative? Y|Y N|N</poll>

yiaU (b3585)

<poll>ABE-0011710-regulator? Y|Y N|N</poll>

<poll>ABE-0011710-positive? Y|Y N|N</poll>

<poll>ABE-0011710-negative? Y|Y N|N</poll>

yidL (b3680)

<poll>ABE-0012034-regulator? Y|Y N|N</poll>

<poll>ABE-0012034-positive? Y|Y N|N</poll>

<poll>ABE-0012034-negative? Y|Y N|N</poll>

yidP (b3684)

<poll>ABE-0012049-regulator? Y|Y N|N</poll>

<poll>ABE-0012049-positive? Y|Y N|N</poll>

<poll>ABE-0012049-negative? Y|Y N|N</poll>

yidZ (b3711)

<poll>ABE-0012141-regulator? Y|Y N|N</poll>

<poll>ABE-0012141-positive? Y|Y N|N</poll>

<poll>ABE-0012141-negative? Y|Y N|N</poll>

yieP (b3755)

<poll>ABE-0012275-regulator? Y|Y N|N</poll>

<poll>ABE-0012275-positive? Y|Y N|N</poll>

<poll>ABE-0012275-negative? Y|Y N|N</poll>

yihL (b3872)

<poll>ABE-0012651-regulator? Y|Y N|N</poll>

<poll>ABE-0012651-positive? Y|Y N|N</poll>

<poll>ABE-0012651-negative? Y|Y N|N</poll>

yihW (b3884)

<poll>ABE-0012683-regulator? Y|Y N|N</poll>

<poll>ABE-0012683-positive? Y|Y N|N</poll>

<poll>ABE-0012683-negative? Y|Y N|N</poll>

yijC (b3963)

<poll>ABE-0012979-regulator? Y|Y N|N</poll>

<poll>ABE-0012979-positive? Y|Y N|N</poll>

<poll>ABE-0012979-negative? Y|Y N|N</poll>

yijO (b3954)

<poll>ABE-0012943-regulator? Y|Y N|N</poll>

<poll>ABE-0012943-positive? Y|Y N|N</poll>

<poll>ABE-0012943-negative? Y|Y N|N</poll>

yjdC (b4135)

<poll>ABE-0013537-regulator? Y|Y N|N</poll>

<poll>ABE-0013537-positive? Y|Y N|N</poll>

<poll>ABE-0013537-negative? Y|Y N|N</poll>

yjeB (b4178)

<poll>ABE-0013676-regulator? Y|Y N|N</poll>

<poll>ABE-0013676-positive? Y|Y N|N</poll>

<poll>ABE-0013676-negative? Y|Y N|N</poll>

yjgJ (b4251)

<poll>ABE-0013918-regulator? Y|Y N|N</poll>

<poll>ABE-0013918-positive? Y|Y N|N</poll>

<poll>ABE-0013918-negative? Y|Y N|N</poll>

yjhI (b4299)

<poll>ABE-0014092-regulator? Y|Y N|N</poll>

<poll>ABE-0014092-positive? Y|Y N|N</poll>

<poll>ABE-0014092-negative? Y|Y N|N</poll>

yjhU (b4295)

<poll>ABE-0014079-regulator? Y|Y N|N</poll>

<poll>ABE-0014079-positive? Y|Y N|N</poll>

<poll>ABE-0014079-negative? Y|Y N|N</poll>

yjiE (b4327)

<poll>ABE-0014192-regulator? Y|Y N|N</poll>

<poll>ABE-0014192-positive? Y|Y N|N</poll>

<poll>ABE-0014192-negative? Y|Y N|N</poll>

yjiR (b4340)

<poll>ABE-0014232-regulator? Y|Y N|N</poll>

<poll>ABE-0014232-positive? Y|Y N|N</poll>

<poll>ABE-0014232-negative? Y|Y N|N</poll>

yjjM (b4357)

<poll>ABE-0014287-regulator? Y|Y N|N</poll>

<poll>ABE-0014287-positive? Y|Y N|N</poll>

<poll>ABE-0014287-negative? Y|Y N|N</poll>

yjjQ (b4365)

<poll>ABE-0014322-regulator? Y|Y N|N</poll>

<poll>ABE-0014322-positive? Y|Y N|N</poll>

<poll>ABE-0014322-negative? Y|Y N|N</poll>

ykgA (b0300)

<poll>ABE-0001032-regulator? Y|Y N|N</poll>

<poll>ABE-0001032-positive? Y|Y N|N</poll>

<poll>ABE-0001032-negative? Y|Y N|N</poll>

ykgD (b0305)

<poll>ABE-0001054-regulator? Y|Y N|N</poll>

<poll>ABE-0001054-positive? Y|Y N|N</poll>

<poll>ABE-0001054-negative? Y|Y N|N</poll>

ykgK (b0294)

<poll>ABE-0001011-regulator? Y|Y N|N</poll>

<poll>ABE-0001011-positive? Y|Y N|N</poll>

<poll>ABE-0001011-negative? Y|Y N|N</poll>

ymfK (b1145)

<poll>ABE-0003851-regulator? Y|Y N|N</poll>

<poll>ABE-0003851-positive? Y|Y N|N</poll>

<poll>ABE-0003851-negative? Y|Y N|N</poll>

yncC (b1450)

<poll>ABE-0004837-regulator? Y|Y N|N</poll>

<poll>ABE-0004837-positive? Y|Y N|N</poll>

<poll>ABE-0004837-negative? Y|Y N|N</poll>

yneJ (b1526)

<poll>ABE-0005096-regulator? Y|Y N|N</poll>

<poll>ABE-0005096-positive? Y|Y N|N</poll>

<poll>ABE-0005096-negative? Y|Y N|N</poll>

ynfL (b1595)

<poll>ABE-0005326-regulator? Y|Y N|N</poll>

<poll>ABE-0005326-positive? Y|Y N|N</poll>

<poll>ABE-0005326-negative? Y|Y N|N</poll>

ypdB (b2381)

<poll>ABE-0007857-regulator? Y|Y N|N</poll>

<poll>ABE-0007857-positive? Y|Y N|N</poll>

<poll>ABE-0007857-negative? Y|Y N|N</poll>

ypdC (b2382)

<poll>ABE-0007859-regulator? Y|Y N|N</poll>

<poll>ABE-0007859-positive? Y|Y N|N</poll>

<poll>ABE-0007859-negative? Y|Y N|N</poll>

yqeI (b2847)

<poll>ABE-0009352-regulator? Y|Y N|N</poll>

<poll>ABE-0009352-positive? Y|Y N|N</poll>

<poll>ABE-0009352-negative? Y|Y N|N</poll>

yqhC (b3010)

<poll>ABE-0009884-regulator? Y|Y N|N</poll>

<poll>ABE-0009884-positive? Y|Y N|N</poll>

<poll>ABE-0009884-negative? Y|Y N|N</poll>

Prediction based on deduced amino acid sequence.

InterPro: IPR000005 Helix-turn-helix, AraC type

ytfH (b4212)

<poll>ABE-0013777-regulator? Y|Y N|N</poll>

<poll>ABE-0013777-positive? Y|Y N|N</poll>

<poll>ABE-0013777-negative? Y|Y N|N</poll>

Predicted based on deduced amino acid sequence.

IPR002577 Helix-turn-helix, HxlR type

zntR (b3292)

<poll>ABE-0010793-regulator? Y|Y N|N</poll>

<poll>ABE-0010793-positive? Y|Y N|N</poll>

<poll>ABE-0010793-negative? Y|Y N|N</poll>

activates transcription of zntA, which encodes a protein involved in metal efflux system

PMID:10048032[36]

zraR (b4004)

<poll>ABE-0013093-regulator? Y|Y N|N</poll>

<poll>ABE-0013093-positive? Y|Y N|N</poll>

<poll>ABE-0013093-negative? Y|Y N|N</poll>

PMID:11243806[37]

zur (b4046)

<poll>ABE-0013249-regulator? Y|Y N|N</poll>

<poll>ABE-0013249-positive? Y|Y N|N</poll>

<poll>ABE-0013249-negative? Y|Y N|N</poll>

repressor of the znu operon, which encodes a Zn2+ uptake system

PMID:9680209[38]

tnaL (b3707)

<poll>ABE-0012128-regulator? Y|Y N|N</poll>

<poll>ABE-0012128-positive? Y|Y N|N</poll>

<poll>ABE-0012128-negative? Y|Y N|N</poll>

This is leader peptide for the tna (tryptophanase) operon. It is involved in attenuation control of transcription of the operon. Not sure if this counts as a txn factor.

Since the action of TnaL is very indirect (TnaL stalls the ribosome which prevents Rho from terminating RNA polymerase.[39]'/>), I would say it is not a transcription factor.

PMID:3902796[40], PMID:16061180[39]

yqeI (b2847)

<poll>ABE-0009352-regulator? Y|Y N|N</poll>

<poll>ABE-0009352-positive? Y|Y N|N</poll>

<poll>ABE-0009352-negative? Y|Y N|N</poll>

Predicted to be a DNA-binding protein based on the deduced amino acid sequence.

InterPro Q46942

edit table

References

See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 Tsang AW & Escalante-Semerena JC (1998) CobB, a new member of the SIR2 family of eucaryotic regulatory proteins, is required to compensate for the lack of nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase activity in cobT mutants during cobalamin biosynthesis in Salmonella typhimurium LT2. J Biol Chem 273: 31788-94 PubMed EcoliWiki page
  2. ↑ 2.0 2.1 Tsang AW et al. (1998) Studies of regulation of expression of the propionate (prpBCDE) operon provide insights into how Salmonella typhimurium LT2 integrates its 1,2-propanediol and propionate catabolic pathways. J Bacteriol 180: 6511-8 PubMed EcoliWiki page
  3. ↑ 3.0 3.1 Larson TJ et al. (1987) Purification and characterization of the repressor for the sn-glycerol 3-phosphate regulon of Escherichia coli K12. J Biol Chem 262: 15869-74 PubMed EcoliWiki page
  4. ↑ 4.0 4.1 Lamark T et al. (1996) The complex bet promoters of Escherichia coli: regulation by oxygen (ArcA), choline (BetI), and osmotic stress. J Bacteriol 178: 1655-62 PubMed EcoliWiki page
  5. ↑ 5.0 5.1 Typas A et al. (2007) Stationary phase reorganisation of the Escherichia coli transcription machinery by Crl protein, a fine-tuner of sigmas activity and levels. EMBO J 26: 1569-78 PubMed EcoliWiki page
  6. ↑ 6.0 6.1 Peekhaus N & Conway T (1998) Positive and negative transcriptional regulation of the Escherichia coli gluconate regulon gene gntT by GntR and the cyclic AMP (cAMP)-cAMP receptor protein complex. J Bacteriol 180: 1777-85 PubMed EcoliWiki page
  7. ↑ 7.0 7.1 Van Dyk TK et al. (2004) Characterization of the Escherichia coli AaeAB efflux pump: a metabolic relief valve? J Bacteriol 186: 7196-204 PubMed EcoliWiki page
  8. ↑ 8.0 8.1 Sperandio V et al. (2002) Quorum-sensing Escherichia coli regulator A: a regulator of the LysR family involved in the regulation of the locus of enterocyte effacement pathogenicity island in enterohemorrhagic E. coli. Infect Immun 70: 3085-93 PubMed EcoliWiki page
  9. ↑ 9.0 9.1 Carter EL et al. (2007) Escherichia coli abg genes enable uptake and cleavage of the folate catabolite p-aminobenzoyl-glutamate. J Bacteriol 189: 3329-34 PubMed EcoliWiki page
  10. ↑ 10.0 10.1 Iuchi S & Lin EC (1988) arcA (dye), a global regulatory gene in Escherichia coli mediating repression of enzymes in aerobic pathways. Proc Natl Acad Sci U S A 85: 1888-92 PubMed EcoliWiki page
  11. ↑ 11.0 11.1 Iuchi S et al. (1989) Differentiation of arcA, arcB, and cpxA mutant phenotypes of Escherichia coli by sex pilus formation and enzyme regulation. J Bacteriol 171: 2889-93 PubMed EcoliWiki page
  12. ↑ 12.0 12.1 Iuchi S et al. (1989) A second global regulator gene (arcB) mediating repression of enzymes in aerobic pathways of Escherichia coli. J Bacteriol 171: 868-73 PubMed EcoliWiki page
  13. ↑ 13.0 13.1 Iwanicka-Nowicka R & Hryniewicz MM (1995) A new gene, cbl, encoding a member of the LysR family of transcriptional regulators belongs to Escherichia coli cys regulon. Gene 166: 11-7 PubMed EcoliWiki page
  14. ↑ 14.0 14.1 Jovanovic M et al. (2003) The LysR-type transcriptional regulator CysB controls the repression of hslJ transcription in Escherichia coli. Microbiology 149: 3449-59 PubMed EcoliWiki page
  15. ↑ 15.0 15.1 Zolkiewski M (1999) ClpB cooperates with DnaK, DnaJ, and GrpE in suppressing protein aggregation. A novel multi-chaperone system from Escherichia coli. J Biol Chem 274: 28083-6 PubMed EcoliWiki page
  16. ↑ 16.0 16.1 Mogk A et al. (1999) Identification of thermolabile Escherichia coli proteins: prevention and reversion of aggregation by DnaK and ClpB. EMBO J 18: 6934-49 PubMed EcoliWiki page
  17. ↑ 17.0 17.1 Lamblin AF & Fuchs JA (1994) Functional analysis of the Escherichia coli K-12 cyn operon transcriptional regulation. J Bacteriol 176: 6613-22 PubMed EcoliWiki page
  18. ↑ 18.0 18.1 Pedersen H et al. (1991) Heterologous cooperativity in Escherichia coli. The CytR repressor both contacts DNA and the cAMP receptor protein when binding to the deoP2 promoter. J Biol Chem 266: 17804-8 PubMed EcoliWiki page
  19. ↑ 19.0 19.1 Heincz MC et al. (1984) Purification and characterization of D-serine deaminase activator protein. J Bacteriol 160: 42-9 PubMed EcoliWiki page
  20. ↑ 20.0 20.1 Gall BG & Hartl DL (1975) Regulation of newly evolved enzymes. II. The ebg repressor. Genetics 81: 427-35 PubMed EcoliWiki page
  21. ↑ 21.0 21.1 Liu X & Matsumura P (1995) An alternative sigma factor controls transcription of flagellar class-III operons in Escherichia coli: gene sequence, overproduction, purification and characterization. Gene 164: 81-4 PubMed EcoliWiki page
  22. ↑ 22.0 22.1 Gu D et al. (2004) Identification and characterization of the DNA-binding domain of the multifunctional PutA flavoenzyme. J Biol Chem 279: 31171-6 PubMed EcoliWiki page
  23. ↑ 23.0 23.1 Little JW et al. (1981) Purified lexA protein is a repressor of the recA and lexA genes. Proc Natl Acad Sci U S A 78: 4199-203 PubMed EcoliWiki page
  24. ↑ 24.0 24.1 Brent R & Ptashne M (1981) Mechanism of action of the lexA gene product. Proc Natl Acad Sci U S A 78: 4204-8 PubMed EcoliWiki page
  25. ↑ 25.0 25.1 Rolfes RJ & Zalkin H (1988) Escherichia coli gene purR encoding a repressor protein for purine nucleotide synthesis. Cloning, nucleotide sequence, and interaction with the purF operator. J Biol Chem 263: 19653-61 PubMed EcoliWiki page
  26. ↑ Choi YL et al. (1989) Cloning and sequencing of an Escherichia coli gene, nlp, highly homologous to the ner genes of bacteriophages Mu and D108. J Bacteriol 171: 5222-5 PubMed EcoliWiki page
  27. ↑ Kawamukai M et al. (1991) Nucleotide sequence and characterization of the sfs1 gene: sfs1 is involved in CRP*-dependent mal gene expression in Escherichia coli. J Bacteriol 173: 2644-8 PubMed EcoliWiki page
  28. ↑ 28.0 28.1 Cao GJ & Sarkar N (1992) Identification of the gene for an Escherichia coli poly(A) polymerase. Proc Natl Acad Sci U S A 89: 10380-4 PubMed EcoliWiki page
  29. ↑ 29.0 29.1 Iwig JS et al. (2006) Nickel homeostasis in Escherichia coli - the rcnR-rcnA efflux pathway and its linkage to NikR function. Mol Microbiol 62: 252-62 PubMed EcoliWiki page
  30. ↑ Horlacher R & Boos W (1997) Characterization of TreR, the major regulator of the Escherichia coli trehalose system. J Biol Chem 272: 13026-32 PubMed EcoliWiki page
  31. ↑ Grandori R et al. (1998) Biochemical characterization of WrbA, founding member of a new family of multimeric flavodoxin-like proteins. J Biol Chem 273: 20960-6 PubMed EcoliWiki page
  32. ↑ Ganduri YL et al. (1993) TdcA, a transcriptional activator of the tdcABC operon of Escherichia coli, is a member of the LysR family of proteins. Mol Gen Genet 240: 395-402 PubMed EcoliWiki page
  33. ↑ Seeger C et al. (1995) Identification and characterization of genes (xapA, xapB, and xapR) involved in xanthosine catabolism in Escherichia coli. J Bacteriol 177: 5506-16 PubMed EcoliWiki page
  34. ↑ Ohnishi H et al. (1975) [Pharmacology of cornary dilator agent, trapymin. (2) Analysis of its mode of action] Nippon Yakurigaku Zasshi 71: 727-38 PubMed EcoliWiki page
  35. ↑ Ma Z et al. (2002) Collaborative regulation of Escherichia coli glutamate-dependent acid resistance by two AraC-like regulators, GadX and GadW (YhiW). J Bacteriol 184: 7001-12 PubMed EcoliWiki page
  36. ↑ Brocklehurst KR et al. (1999) ZntR is a Zn(II)-responsive MerR-like transcriptional regulator of zntA in Escherichia coli. Mol Microbiol 31: 893-902 PubMed EcoliWiki page
  37. ↑ Leonhartsberger S et al. (2001) The hydH/G Genes from Escherichia coli code for a zinc and lead responsive two-component regulatory system. J Mol Biol 307: 93-105 PubMed EcoliWiki page
  38. ↑ Patzer SI & Hantke K (1998) The ZnuABC high-affinity zinc uptake system and its regulator Zur in Escherichia coli. Mol Microbiol 28: 1199-210 PubMed EcoliWiki page
  39. ↑ 39.0 39.1 Cruz-Vera LR et al. (2005) Features of ribosome-peptidyl-tRNA interactions essential for tryptophan induction of tna operon expression. Mol Cell 19: 333-43 PubMed EcoliWiki page
  40. ↑ Stewart V & Yanofsky C (1985) Evidence for transcription antitermination control of tryptophanase operon expression in Escherichia coli K-12. J Bacteriol 164: 731-40 PubMed EcoliWiki page
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