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Multiple alignment of nucleic acid and protein sequences
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CLUSTALW is a widely used tool for multiple sequence alignments. It is a the command-line version of the CLUSTAL family of alignment programs, which includes CLUSTALX, a graphical version that runs on Linux, Macs, and Windows. Although CLUSTALW is a command line program, it is often accessed via a web interface, such as those at EBI and Swiss Institute of Bioinformatics.
Hardware/Software requirements, if applicable
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- Thompson, JD et al. (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25 4876-82 PubMed EcoliWiki page
- Chenna, R et al. (2003) Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Res. 31 3497-500 PubMed EcoliWiki page