ahpF:Gene Product(s) - EcoliWiki
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ahpF:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

AhpF

Synonyms

alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding[1], B0606[2][1], AhpF[2][1], alkyl hydroperoxide reductase, F52a subunit[2][1]

Product description

AhpF component[2][3];

Component of ; alkylhydroperoxide reductase[3]

EC number (for enzymes)
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

QualifierGO IDGO term nameReference(s)Evidence Codewith/fromAspectNotesStatus
GO:0016491

oxidoreductase activity

GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000004

IEA: Inferred from Electronic Annotation

InterPro:IPR000103
InterPro:IPR001327
InterPro:IPR003042
InterPro:IPR008255
SP_KW:KW-0560

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0016651

oxidoreductase activity, acting on NADH or NADPH

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012081

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0050660

FAD binding

GO_REF:0000002
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001327
InterPro:IPR012081

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0051287

NAD binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012081

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0005515

protein binding

PMID:16606699[5]

IPI: Inferred from Physical Interaction

UniProtKB:P07604

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0005515

protein binding

PMID:16606699[5]

IPI: Inferred from Physical Interaction

UniProtKB:P32719

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0005737

cytoplasm

C

Seeded from Riley et al 2006 [1].

required fields missing

GO:0006805

xenobiotic metabolic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0009398

FMN biosynthetic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

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Interactions

Partner TypePartnerNotesReferences

Protein

Subunits of alkylhydroperoxide reductase

could be indirect


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Notes

Localization

CompartmentDescriptionEvidenceNotes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MMMFKAQEIN MLDTNMKTQL KAYLEKLTKP VELIATLDDS AKSAEIKELL AEIAELSDKV
TFKEDNSLPV RKPSFLITNP GSNQGPRFAG SPLGHEFTSL VLALLWTGGH PSKEAQSLLE
QIRHIDGDFE FETYYSLSCH NCPDVVQALN LMSVLNPRIK HTAIDGGTFQ NEITDRNVMG
VPAVFVNGKE FGQGRMTLTE IVAKIDTGAE KRAAEELNKR DAYDVLIVGS GPAGAAAAIY
SARKGIRTGL MGERFGGQIL DTVDIENYIS VPKTEGQKLA GALKVHVDEY DVDVIDSQSA
SKLIPAAVEG GLHQIETASG AVLKARSIIV ATGAKWRNMN VPGEDQYRTK GVTYCPHCDG
PLFKGKRVAV IGGGNSGVEA AIDLAGIVEH VTLLEFAPEM KADQVLQDKL RSLKNVDIIL
NAQTTEVKGD GSKVVGLEYR DRVSGDIHNI ELAGIFVQIG LLPNTNWLEG AVERNRMGEI
IIDAKCETNV KGVFAAGDCT TVPYKQIIIA TGEGAKASLS AFDYLIRTKT A
Mol. Wt

56.18 kDa (calc) [2]

pI
Extinction coefficient

34380 - 35130 (calc based on 12 Y, 3 W, and 6 C residues)

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Domains/Motifs/Modification Sites

TypeResiduesDescriptionNotes
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Structure

Structures
  • Representative Escherichia coli structure:
    1FL2|A
    1-310 of 531 residues (E-value: 1.6e-162) (Percent Identity: 100.00)
  • Representative homolog:
    1EBD|A (Geobacillus stearothermophilus)
    68-172 of 531 residues (E-value: 1.0e-07) (Percent Identity: 28.97)
  • View all other structures.
Models

View models at:

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Notes

Gene Product Resources

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Resource typeSourceNotes/Reference
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Notes

Accessions in Other Databases

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DatabaseAccessionNotes

EcoCyc (EcoliWiki Page)

EcoCyc:EG11385-MONOMER

SwissModel (EcoliWiki Page)

SwissModel:P35340

UniProt (EcoliWiki Page)

UniProt:P35340

PFAM (EcoliWiki Page)

PFAM:PF00070

RefSeq (EcoliWiki Page)

RefSeq:NP_415139

ModBase (EcoliWiki Page)

ModBase:P35340

PDB (EcoliWiki Page)

PDB:1FL2


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Notes

Links

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NameURLComments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 4.2 4.3 4.4 4.5 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  5. ↑ 5.0 5.1 Arifuzzaman M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res 16: 686-91 PubMed EcoliWiki page


Categories

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