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allA:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

AllA

Synonyms

ureidoglycolate hydrolase[1], B0505[2][1], YbbT[2][1], AllA[2][1]

Product description

G6275[2][3]

EC number (for enzymes)
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

QualifierGO IDGO term nameReference(s)Evidence Codewith/fromAspectNotesStatus
GO:0000256

allantoin catabolic process

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007247

P

Seeded from EcoCyc 12.5 [4]

complete

GO:0006144

purine base metabolic process

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0659

P

Seeded from EcoCyc 12.5 [4]

complete

GO:0006145

purine base catabolic process

GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00616

P

Seeded from EcoCyc 12.5 [4]

complete

GO:0016787

hydrolase activity

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0378

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0050385

ureidoglycolate lyase activity

PMID:10601204[5]

IDA: Inferred from Direct Assay

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0005737

cytoplasm

C

Seeded from Riley et al 2006 [1].

required fields missing

GO:0006807

nitrogen compound metabolic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0009442

allantoin assimilation pathway

P

Seeded from EcoCyc 11.1[3].

required fields missing

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Interactions

Partner TypePartnerNotesReferences
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Notes

Localization

CompartmentDescriptionEvidenceNotes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MKLQVLPLSQ EAFSAYGDVI ETQQRDFFHI NNGLVERYHD LALVEILEQD CTLISINRAQ
PANLPLTIHE LERHPLGTQA FIPMKGEVFV VVVALGDDKP DLSTLRAFIT NGEQGVNYHR
NVWHHPLFAW QRVTDFLTID RGGSDNCDVE SIPEQELCFA
Mol. Wt

18.17 kDa (calc) [2]

pI
Extinction coefficient

15470 - 15845 (calc based on 3 Y, 2 W, and 3 C residues)

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Domains/Motifs/Modification Sites

TypeResiduesDescriptionNotes
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Structure

Structures
  • Representative Escherichia coli structure:
    1XSQ|A
    2-160 of 160 residues (E-value: 2.0e-84) (Percent Identity: 99.37)
  • Representative homolog:
    1XSR|A (Shigella flexneri)
    2-160 of 160 residues (E-value: 3.7e-83) (Percent Identity: 98.74)
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Models

View models at:

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Notes

Gene Product Resources

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Resource typeSourceNotes/Reference
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Notes

Accessions in Other Databases

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DatabaseAccessionNotes

EcoCyc (EcoliWiki Page)

EcoCyc:G6275-MONOMER

UniProt (EcoliWiki Page)

UniProt:P77731

PFAM (EcoliWiki Page)

PFAM:PF04115

RefSeq (EcoliWiki Page)

RefSeq:NP_415038

PDB (EcoliWiki Page)

PDB:1XSQ


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Notes

Links

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NameURLComments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 4.2 4.3 4.4 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  5. ↑ Cusa E et al. (1999) Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli. J Bacteriol 181: 7479-84 PubMed EcoliWiki page


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