argS:Gene Product(s) - EcoliWiki
EcoliHub logo

E. coli is indeed the coolest thing on the planet - Carl Zimmer

argS:Gene Product(s)

From EcoliWiki

Jump to: navigation, search


Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

ArgS

Synonyms

arginyl-tRNA synthetase[1], B1876[2][1], Lov[2][1], ArgS[2][1], ArgRS[2][1]

Product description

ARGS[2][3]

EC number (for enzymes)
edit table

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Notes

Function

[back to top]


Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

QualifierGO IDGO term nameReference(s)Evidence Codewith/fromAspectNotesStatus
GO:0005524

ATP binding

GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000004
GO_REF:0000020

IEA: Inferred from Electronic Annotation

InterPro:IPR001278
InterPro:IPR001412
InterPro:IPR005148
InterPro:IPR008909
InterPro:IPR009080
InterPro:IPR015945
SP_KW:KW-0067
HAMAP:MF_00123

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0004814

arginine-tRNA ligase activity

GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000003
GO_REF:0000020

IEA: Inferred from Electronic Annotation

InterPro:IPR001278
InterPro:IPR005148
InterPro:IPR008909
InterPro:IPR015945
EC:6.1.1.19
HAMAP:MF_00123

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0000166

nucleotide binding

GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000004

IEA: Inferred from Electronic Annotation

InterPro:IPR001278
InterPro:IPR001412
InterPro:IPR005148
InterPro:IPR009080
InterPro:IPR015945
SP_KW:KW-0547

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0004812

aminoacyl-tRNA ligase activity

GO_REF:0000002
GO_REF:0000002
GO_REF:0000004

IEA: Inferred from Electronic Annotation

InterPro:IPR001412
InterPro:IPR009080
SP_KW:KW-0030

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0005737

cytoplasm

GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000004

IEA: Inferred from Electronic Annotation

InterPro:IPR001278
InterPro:IPR001412
InterPro:IPR005148
InterPro:IPR009080
InterPro:IPR015945
SP_KW:KW-0963

C

Seeded from EcoCyc 12.5 [4]

complete

GO:0016874

ligase activity

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0436

F

Seeded from EcoCyc 12.5 [4]

complete

GO:0006420

arginyl-tRNA aminoacylation

GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000020

IEA: Inferred from Electronic Annotation

InterPro:IPR001278
InterPro:IPR005148
InterPro:IPR008909
InterPro:IPR015945
HAMAP:MF_00123

P

Seeded from EcoCyc 12.5 [4]

complete

GO:0006412

translation

GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000002
GO_REF:0000004

IEA: Inferred from Electronic Annotation

InterPro:IPR001278
InterPro:IPR001412
InterPro:IPR005148
InterPro:IPR009080
InterPro:IPR015945
SP_KW:KW-0648

P

Seeded from EcoCyc 12.5 [4]

complete

GO:0006418

tRNA aminoacylation for protein translation

GO_REF:0000002
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001412
InterPro:IPR009080

P

Seeded from EcoCyc 12.5 [4]

complete

edit table

Interactions

Partner TypePartnerNotesReferences
edit table

See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Notes

Localization

CompartmentDescriptionEvidenceNotes
edit table

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Notes

Structure and Physical Properties

[back to top]


Physical Properties

Sequence

at EcoCyc

MNIQALLSEK VRQAMIAAGA PADCEPQVRQ SAKVQFGDYQ ANGMMAVAKK LGMAPRQLAE
QVLTHLDLNG IASKVEIAGP GFINIFLDPA FLAEHVQQAL ASDRLGVATP EKQTIVVDYS
APNVAKEMHV GHLRSTIIGD AAVRTLEFLG HKVIRANHVG DWGTQFGMLI AWLEKQQQEN
AGEMELADLE GFYRDAKKHY DEDEEFAERA RNYVVKLQSG DEYFREMWRK LVDITMTQNQ
ITYDRLNVTL TRDDVMGESL YNPMLPGIVA DLKAKGLAVE SEGATVVFLD EFKNKEGEPM
GVIIQKKDGG YLYTTTDIAC AKYRYETLHA DRVLYYIDSR QHQHLMQAWA IVRKAGYVPE
SVPLEHHMFG MMLGKDGKPF KTRAGGTVKL ADLLDEALER ARRLVAEKNP DMPADELEKL
ANAVGIGAVK YADLSKNRTT DYIFDWDNML AFEGNTAPYM QYAYTRVLSV FRKAEIDEEQ
LAAAPVIIRE DREAQLAARL LQFEETLTVV AREGTPHVMC AYLYDLAGLF SGFYEHCPIL
SAENEEVRNS RLKLAQLTAK TLKLGLDTLG IETVERM
Mol. Wt

64.68 kDa (calc) [2]

pI
Extinction coefficient

61770 - 62270 (calc based on 23 Y, 5 W, and 4 C residues)

edit table

See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

TypeResiduesDescriptionNotes
edit table

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Structure

Structures
  • Representative homolog:
    1BS2|A (Saccharomyces cerevisiae)
    80-607 of 577 residues (E-value: 1.6e-68) (Percent Identity: 34.56)
  • View all other structures.
Models

View models at:

edit table

See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Notes

Gene Product Resources

[back to top]


Resource typeSourceNotes/Reference
edit table

See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Notes

Accessions in Other Databases

[back to top]


DatabaseAccessionNotes

EcoCyc (EcoliWiki Page)

EcoCyc:ARGS-MONOMER

UniProt (EcoliWiki Page)

UniProt:P11875

PFAM (EcoliWiki Page)

PFAM:PF03485

RefSeq (EcoliWiki Page)

RefSeq:NP_416390

ModBase (EcoliWiki Page)

ModBase:P11875


edit table

See Help:Product_accessions for help entering or editing information in this section of EcoliWiki.

Notes

Links

[back to top]


NameURLComments
edit table

See Help:Links_table for how to enter or edit information in this section of EcoliWiki.



References

[back to top]


See Help:References for how to manage references in EcoliWiki.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

[back to top]


Personal tools