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aspS:Gene Product(s)
From EcoliWiki
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
| Standard name |
AspS |
|---|---|
| Synonyms |
aspartyl-tRNA synthetase[1], B1866[2][1], Tls[2][1], AspS[2][1] |
| Product description |
aspartyl-tRNA synthetase[2][3]; Component of ; aspartyl-tRNA synthetase[2][3] |
| EC number (for enzymes) | |
| edit table |
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
Notes
Function
Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0003676 |
nucleic acid binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc 12.5 [4] |
complete | |||
| GO:0004812 |
aminoacyl-tRNA ligase activity |
IEA: Inferred from Electronic Annotation |
InterPro:IPR004115 |
F |
Seeded from EcoCyc 12.5 [4] |
complete | ||
| GO:0006418 |
tRNA aminoacylation for protein translation |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc 12.5 [4] |
complete | |||
| GO:0000166 |
nucleotide binding |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002312 |
F |
Seeded from EcoCyc 12.5 [4] |
complete | |
| GO:0006412 |
translation |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002312 |
P |
Seeded from EcoCyc 12.5 [4] |
complete | |
| GO:0004815 |
aspartate-tRNA ligase activity |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002312 |
F |
Seeded from EcoCyc 12.5 [4] |
complete | ||
| GO:0005524 |
ATP binding |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002312 |
F |
Seeded from EcoCyc 12.5 [4] |
complete | |
| GO:0005737 |
cytoplasm |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002312 |
C |
Seeded from EcoCyc 12.5 [4] |
complete | |
| GO:0006422 |
aspartyl-tRNA aminoacylation |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc 12.5 [4] |
complete | |||
| GO:0016874 |
ligase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc 12.5 [4] |
complete | |||
| GO:0004815 |
aspartate-tRNA ligase activity |
IDA: Inferred from Direct Assay |
F |
Seeded from EcoCyc 12.5 [4] |
complete | |||
| GO:0006422 |
aspartyl-tRNA aminoacylation |
IDA: Inferred from Direct Assay |
P |
Seeded from EcoCyc 12.5 [4] |
complete | |||
| edit table |
Interactions
| Partner Type | Partner | Notes | References |
|---|---|---|---|
|
Protein |
Subunits of aspartyl-tRNA synthetase |
could be indirect |
|
| edit table |
See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
Notes
Localization
| Compartment | Description | Evidence | Notes |
|---|---|---|---|
| edit table |
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
Notes
Structure and Physical Properties
Physical Properties
| Sequence |
MRTEYCGQLR LSHVGQQVTL CGWVNRRRDL GSLIFIDMRD REGIVQVFFD PDRADALKLA SELRNEFCIQ VTGTVRARDE KNINRDMATG EIEVLASSLT IINRADVLPL DSNHVNTEEA RLKYRYLDLR RPEMAQRLKT RAKITSLVRR FMDDHGFLDI ETPMLTKATP EGARDYLVPS RVHKGKFYAL PQSPQLFKQL LMMSGFDRYY QIVKCFRDED LRADRQPEFT QIDVETSFMT APQVREVMEA LVRHLWLEVK GVDLGDFPVM TFAEAERRYG SDKPDLRNPM ELTDVADLLK SVEFAVFAGP ANDPKGRVAA LRVPGGASLT RKQIDEYGNF VKIYGAKGLA YIKVNERAKG LEGINSPVAK FLNAEIIEDI LDRTAAQDGD MIFFGADNKK IVADAMGALR LKVGKDLGLT DESKWAPLWV IDFPMFEDDG EGGLTAMHHP FTSPKDMTAA ELKAAPENAV ANAYDMVING YEVGGGSVRI HNGDMQQTVF GILGINEEEQ REKFGFLLDA LKYGTPPHAG LAFGLDRLTM LLTGTDNIRD VIAFPKTTAA ACLMTEAPSF ANPTALAELS IQVVKKAENN |
|---|---|
| Mol. Wt |
65.91 kDa (calc) [2] |
| pI | |
| Extinction coefficient |
42860 - 43485 (calc based on 14 Y, 4 W, and 5 C residues) |
| edit table |
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
Domains/Motifs/Modification Sites
| Type | Residues | Description | Notes |
|---|---|---|---|
| edit table |
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
Structure
| Structures |
|
|---|---|
| Models |
View models at: |
| edit table |
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.
Notes
Gene Product Resources
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
Notes
Accessions in Other Databases
| Database | Accession | Notes |
|---|---|---|
|
| ||
| edit table |
See Help:Product_accessions for help entering or editing information in this section of EcoliWiki.
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
See Help:Links_table for how to enter or edit information in this section of EcoliWiki.
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 5.0 5.1 Martin F et al. (1997) Characterization of a thermosensitive Escherichia coli aspartyl-tRNA synthetase mutant. J Bacteriol 179: 3691-6 PubMed EcoliWiki page
Categories
Categories: GO:0003676 ! nucleic acid binding | GO:0004812 ! aminoacyl-tRNA ligase activity | GO:0006418 ! tRNA aminoacylation for protein translation | GO:0000166 ! nucleotide binding | GO:0006412 ! translation | GO:0004815 ! aspartate-tRNA ligase activity | GO:0005524 ! ATP binding | GO:0005737 ! cytoplasm | GO:0006422 ! aspartyl-tRNA aminoacylation | GO:0016874 ! ligase activity | Proteins | Complex:aspartyl-tRNA synthetase | Products with structures in PDB
