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caiA:Gene Product(s)
From EcoliWiki
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
CaiA |
|---|---|
| Synonyms |
crotonobetaine reductase subunit II, FAD-binding[1], B0039[2][1], YaaO[2][1], CaiA[2][1] |
| Product description |
Crotonobetaine reductase, CII component[3] |
| EC number (for enzymes) | |
| edit table |
Notes
Function
Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0050660 |
FAD binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [4] |
complete | |||
| GO:0003995 |
acyl-CoA dehydrogenase activity |
IEA: Inferred from Electronic Annotation |
InterPro:IPR006089 |
F |
Seeded from EcoCyc 12.5 [5] |
complete | ||
| GO:0008152 |
metabolic process |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [4] |
complete | |||
| GO:0016491 |
oxidoreductase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [4] |
complete | |||
| GO:0016627 |
oxidoreductase activity, acting on the CH-CH group of donors |
IEA: Inferred from Electronic Annotation |
InterPro:IPR006090 |
F |
Seeded from EcoCyc [4] |
complete | ||
| GO:0005737 |
cytoplasm |
C |
Seeded from EcoCyc 11.1[6]. |
required fields missing | ||||
| GO:0009055 |
electron carrier activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [4] |
complete | |||
| GO:0055114 |
oxidation reduction |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [4] |
complete | |||
| GO:0006097 |
glyoxylate cycle |
P |
Seeded from Riley et al 2006 [1]. |
required fields missing | ||||
| GO:0009310 |
amine catabolic process |
P |
Seeded from Riley et al 2006 [1]. |
required fields missing | ||||
| GO:0042413 |
carnitine catabolic process |
P |
Seeded from EcoCyc 11.1[6]. |
required fields missing | ||||
| GO:0009054 |
electron acceptor activity |
F |
Seeded from EcoCyc 11.1[6]. |
required fields missing | ||||
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
|
Protein |
Experiment(s):EBI-1135403 | |||
|
Protein |
Experiment(s):EBI-1135403 | |||
|
Protein |
Experiment(s):EBI-1135403 | |||
|
Protein |
Experiment(s):EBI-1135403 | |||
| edit table |
Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Source | Notes |
|---|---|---|---|---|
|
cytoplasm |
From EcoCyc[6] |
| ||
| edit table |
Notes
Structure and Physical Properties
Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Sequence |
MDFNLNDEQE LFVAGIRELM ASENWEAYFA ECDRDSVYPE RFVKALADMG IDSLLIPEEH GGLDAGFVTL AAVWMELGRL GAPTYVLYQL PGGFNTFLRE GTQEQIDKIM AFRGTGKQMW NSAITEPGAG SDVGSLKTTY TRRNGKIYLN GSKCFITSSA YTPYIVVMAR DGASPDKPVY TEWFVDMSKP GIKVTKLEKL GLRMDSCCEI TFDDVELDEK DMFGREGNGF NRVKEEFDHE RFLVALTNYG TAMCAFEDAA RYANQRVQFG EAIGRFQLIQ EKFAHMAIKL NSMKNMLYEA AWKADNGTIT SGDAAMCKYF CANAAFEVVD SAMQVLGGVG IAGNHRISRF WRDLRVDRVS GGSDEMQILT LGRAVLKQYR |
|---|---|
| Length |
380 |
| Mol. Wt |
42.558 kDa |
| pI |
5.0 (calculated) |
| Extinction coefficient |
53,860 - 54,735 (calc based on 14 Y, 6 W, and 7 C residues) |
| edit table |
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See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
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Structure
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Structure figures
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| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
| ||
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 4.0 4.1 4.2 4.3 4.4 4.5 EcoCyc (release 13.0; 2009) Keseler, IM et al. (2009) Nucleic Acids Res. 37(Database issue):D464-70
- ↑ EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 6.0 6.1 6.2 6.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 7.0 7.1 7.2 7.3 Arifuzzaman M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res 16: 686-91 PubMed EcoliWiki page
