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eutR:Gene

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Nomenclature Location(s) and DNA Sequence Alleles and Phenotypes Genetic Resources Accessions Links References Suggestions

Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

eutR

Mnemonic

Ethanolamine utilization

Synonyms

yfeG, ECK2432, b2437, JW2430[1][2]

Notes

Location(s) and DNA Sequence

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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

StrainMap locationGenome coordinatesGenome browsersSequence links

MG1655

55.01 minutes 

MG1655: 2553204..2552152
gbrowse_img.php?coord=2552152..2553204&genome=ecoli&name=MG1655&trackset=0&width=300&.png

W3110

 

W3110: 2560628..2559576
gbrowse_img.php?coord=2559576..2560628&genome=ecoli_W3110&name=W3110&trackset=0&width=300&.png

BW2952

NC_012759: 2437957..2439009
gbrowse_img.php?coord=2437957..2439009&genome=BW2952&name=NC_012759&trackset=0&width=300&.png

Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature typeLocationDescription

Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

AlleleNt change(s)AA change(s)Phenotype: TypePhenotype: DescriptionReferenceAvailabilityComments

yfeG::Tn5KAN

PMID:12519969[3]

ASAP

At position 273 in Minus orientation, does not contain plasmid pKD46.
ASAP strain name: FB20800

yfeG::Tn5KAN

PMID:12519969[3]

ASAP

At position 273 in Minus orientation, contains plasmid pKD46.
ASAP strain name: FB20801

ΔeutR766::kan

PMID:16738554[4]

CGSC:106178


Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

ResourceResource TypeSourceNotes/Reference

Plasmid clone

Shigen

PMID:16769691[5]

Status:

Primer 1:

Primer 2:

Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

DatabaseAccessionNotes

EcoCyc (EcoliWiki Page)

EcoCyc:EG12190

EchoBASE (EcoliWiki Page)

EchoBASE:EB2107

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b2437

ECOL199310CYC (EcoliWiki Page)

ECOL199310CYC:C2971

EcoGene (EcoliWiki Page)

EcoGene:EG12190

ECOO157CYC (EcoliWiki Page)

ECOO157CYC:YFEG

ASAP (EcoliWikiPage)

ASAP:ABE-0008036


Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. 3.0 3.1 Glasner JD et al. (2003) ASAP, a systematic annotation package for community analysis of genomes. Nucleic Acids Res 31: 147-51 PubMed EcoliWiki page
  4. Baba T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol 2: 2006.0008 PubMed EcoliWiki page
  5. Kitagawa M et al. (2005) Complete set of ORF clones of Escherichia coli ASKA library (A Complete Set of E. coli K-12 ORF Archive): Unique Resources for Biological Research. DNA Res 12: 291-9 PubMed EcoliWiki page

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