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folA:Gene
From EcoliWiki
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Location(s) and DNA Sequence | Alleles and Phenotypes | Genetic Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.
| Standard name |
folA |
|---|---|
| Mnemonic |
Folate |
| Synonyms |
ECK0049, b0048, JW0047, tmrA, tmr[1] |
| edit table |
Notes
Location(s) and DNA Sequence
See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.
| Strain | Map location | Genome coordinates | Genome browsers | Sequence links |
|---|---|---|---|---|
|
MG1655 |
1.07 minutes |
MG1655: 49823..50302 | ||
|
NC_012967: 54018..54497 | ||||
|
W3110 |
|
W3110: 49823..50302 | ||
|
DH10B: 49823..50302 | ||||
|
NC_012759: 49823..50302 | ||||
| edit table |
Notes
Sequence Features
See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.
| Feature type | Location | Description |
|---|---|---|
| edit table |
Notes
Alleles and Phenotypes
See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.
| Allele | Nt change(s) | AA change(s) | Phenotype: Type | Phenotype: Description | Reference | Availability | Comments |
|---|---|---|---|---|---|---|---|
|
folAL28R |
L28R |
(in strain: B[RT500] isozyme 2) |
Strain variation; seeded from UniProt:P0ABQ4 | ||||
|
folAW30G |
W30G |
(in strain: 1810) |
Strain variation; seeded from UniProt:P0ABQ4 | ||||
|
folAE154K |
E154K |
(in strain: B[MB1428]) |
Strain variation; seeded from UniProt:P0ABQ4 | ||||
|
folAE154Q |
E154Q |
(in strain: 1810) |
Strain variation; seeded from UniProt:P0ABQ4 | ||||
|
ΔfolA207::kan | |||||||
|
ΔfolA201::kan |
| ||||||
| edit table |
Notes
Genetic Resources
See Help:Gene_resources for help entering information into the Genetic Resources table.
| Resource | Resource Type | Source | Notes/Reference |
|---|---|---|---|
|
JW0047 |
Plasmid clone |
Status:Clone OK Primer 1:GCCATCAGTCTGATTGCGGCGTT Primer 2:CCCCGCCGCTCCAGAATCTCAAA | |
|
Linked marker |
est. P1 cotransduction: 54% [5] | ||
|
leuO3051::Tn10 |
Linked marker |
est. P1 cotransduction: 26% [5] | |
| edit table |
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
| ||
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
- ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ Ahrweiler PM & Frieden C (1988) Construction of a fol mutant strain of Escherichia coli for use in dihydrofolate reductase mutagenesis experiments. J Bacteriol 170: 3301-4 PubMed EcoliWiki page
- ↑ Kitagawa M et al. (2005) Complete set of ORF clones of Escherichia coli ASKA library (A Complete Set of E. coli K-12 ORF Archive): Unique Resources for Biological Research. DNA Res 12: 291-9 PubMed EcoliWiki page
- ↑ 4.0 4.1 CGSC: The Coli Genetics Stock Center
- ↑ 5.0 5.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).
