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galE:Gene Product(s)
From EcoliWiki
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
GalE |
|---|---|
| Synonyms |
UDP-galactose-4-epimerase[1], B0759[2][1], GalD[2][1], GalE[2][1] |
| Product description |
UDP-glucose 4-epimerase[2][3]; Component of UDP-glucose 4-epimerase[2][3] UDP-galactose 4-epimerase; hexose-1-phosphate uridylyltransferase[4] |
| EC number (for enzymes) | |
| edit table |
Notes
Function
Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0003824 |
catalytic activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc 12.5 [5] |
complete | |||
| GO:0003978 |
UDP-glucose 4-epimerase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [6] |
complete | |||
| GO:0005975 |
carbohydrate metabolic process |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [6] |
complete | |||
| GO:0006012 |
galactose metabolic process |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [6] |
complete | |||
| GO:0016853 |
isomerase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [6] |
complete | |||
| GO:0044237 |
cellular metabolic process |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [6] |
complete | |||
| GO:0050662 |
coenzyme binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [6] |
complete | |||
| GO:0005737 |
cytoplasm |
C |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
| GO:0005488 |
binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [6] |
complete | |||
| GO:0005829 |
cytosol |
IDA: Inferred from Direct Assay |
C |
Seeded from EcoCyc [6] |
complete | |||
| GO:0008152 |
metabolic process |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [6] |
complete | |||
| GO:0009242 |
colanic acid biosynthetic process |
IMP: Inferred from Mutant Phenotype |
P |
Seeded from EcoCyc 11.1[3]. |
complete | |||
| GO:0016052 |
carbohydrate catabolic process |
P |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
| GO:0009435 |
NAD biosynthetic process |
P |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
|
Under review | GO:0009269 |
response to desiccation |
P |
Seeded from EcoCyc 11.1[3]. See discussion page. |
required field missing | |||
|
Under review | GO:0042603 |
capsule |
C |
Seeded from EcoCyc 11.1[3]. GalE is not located in the capsule. |
required field missing | |||
| GO:0006012 |
galactose metabolic process |
IMP: Inferred from Mutant Phenotype |
P |
complete | ||||
| GO:0005975 |
carbohydrate metabolic process |
IMP: Inferred from Mutant Phenotype |
P |
complete | ||||
| GO:0006012 |
galactose metabolic process |
IMP: Inferred from Mutant Phenotype |
P |
Seeded from EcoCyc 12.5 [5] |
complete | |||
| GO:0016052 |
carbohydrate catabolic process |
IGI: Inferred from Genetic Interaction |
P |
complete | ||||
| GO:0016857 |
racemase and epimerase activity, acting on carbohydrates and derivatives |
IDA: Inferred from Direct Assay |
F |
complete | ||||
| GO:0006012 |
galactose metabolic process |
IDA: Inferred from Direct Assay |
P |
complete | ||||
| GO:0005737 |
cytoplasm |
IDA: Inferred from Direct Assay |
C |
complete | ||||
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
|
Protein |
Subunits of UDP-glucose 4-epimerase |
could be indirect | ||
|
Protein |
Experiment(s):EBI-1137880 | |||
|
Protein |
Experiment(s):EBI-1137880 | |||
|
Protein |
Experiment(s):EBI-1137880 | |||
| edit table |
Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Source | Notes |
|---|---|---|---|---|
| edit table |
Notes
Structure and Physical Properties
Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Sequence |
MRVLVTGGSG YIGSHTCVQL LQNGHDVIIL DNLCNSKRSV LPVIERLGGK HPTFVEGDIR NEALMTEILH DHAIDTVIHF AGLKAVGESV QKPLEYYDNN VNGTLRLISA MRAANVKNFI FSSSATVYGD QPKIPYVESF PTGTPQSPYG KSKLMVEQIL TDLQKAQPDW SIALLRYFNP VGAHPSGDMG EDPQGIPNNL MPYIAQVAVG RRDSLAIFGN DYPTEDGTGV RDYIHVMDLA DGHVVAMEKL ANKPGVHIYN LGAGVGNSVL DVVNAFSKAC GKPVNYHFAP RREGDLPAYW ADASKADREL NWRVTRTLDE MAQDTWHWQS RHPQGYPD |
|---|---|
| Length |
338 |
| Mol. Wt |
37.264 kDa |
| pI |
6.3 (calculated) |
| Extinction coefficient |
48,360 - 48,735 (calc based on 14 Y, 5 W, and 3 C residues) |
| edit table |
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See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
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Structure
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Structure figures
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| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
| ||
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 5.0 5.1 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.8 EcoCyc (release 13.0; 2009) Keseler, IM et al. (2009) Nucleic Acids Res. 37(Database issue):D464-70
- ↑ Lasserre JP et al. (2006) A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis. Electrophoresis 27: 3306-21 PubMed EcoliWiki page
- ↑ Trisler P & Gottesman S (1984) lon transcriptional regulation of genes necessary for capsular polysaccharide synthesis in Escherichia coli K-12. J Bacteriol 160: 184-91 PubMed EcoliWiki page
- ↑ 9.0 9.1 9.2 Fietta A et al. (1981) R-factor-mediated suppression of the galactose-sensitive phenotype of Escherichia coli K-12 galE Mutants. Plasmid 6: 78-85 PubMed EcoliWiki page
- ↑ SOFFER RL (1961) Enzymatic expression of genetic units of function concerned with galactose metabolism in Escherichia coli. J Bacteriol 82: 471-8 PubMed EcoliWiki page
- ↑ 11.0 11.1 11.2 Vorgias CE et al. (1991) Overexpression and purification of the galactose operon enzymes from Escherichia coli. Protein Expr Purif 2: 330-8 PubMed EcoliWiki page
- ↑ 12.0 12.1 12.2 Arifuzzaman M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res 16: 686-91 PubMed EcoliWiki page

