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poxA:Gene Product(s)
From EcoliWiki
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
| Standard name |
PoxA product |
|---|---|
| Synonyms |
predicted lysyl-tRNA synthetase product[1], B4155 product[2][1], YjeA product[2][1], GenX product[2][1], PoxA product[2][1] |
| Product description | |
| EC number (for enzymes) |
|
| edit table |
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
Notes
Function
Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded from EcoCyc 12.5 [5] |
complete | |||
| GO:0016874 |
ligase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc 12.5 [5] |
complete | |||
| GO:0006430 |
lysyl-tRNA aminoacylation |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002313 |
P |
Seeded from EcoCyc 12.5 [5] |
complete | ||
| GO:0006418 |
tRNA aminoacylation for protein translation |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc 12.5 [5] |
complete | |||
| GO:0006412 |
translation |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002313 |
P |
Seeded from EcoCyc 12.5 [5] |
complete | |
| GO:0005737 |
cytoplasm |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002313 |
C |
Seeded from EcoCyc 12.5 [5] |
complete | ||
| GO:0005524 |
ATP binding |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002313 |
F |
Seeded from EcoCyc 12.5 [5] |
complete | |
| GO:0004824 |
lysine-tRNA ligase activity |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002313 |
F |
Seeded from EcoCyc 12.5 [5] |
complete | ||
| GO:0004812 |
aminoacyl-tRNA ligase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc 12.5 [5] |
complete | |||
| GO:0000166 |
nucleotide binding |
GO_REF:0000002 |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002313 |
F |
Seeded from EcoCyc 12.5 [5] |
complete | |
| GO:0042867 |
pyruvate catabolic process |
P |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
| edit table |
Interactions
| Partner Type | Partner | Notes | References |
|---|---|---|---|
| edit table |
See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
Notes
Localization
| Compartment | Description | Evidence | Notes |
|---|---|---|---|
| edit table |
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
Notes
Structure and Physical Properties
Physical Properties
| Sequence |
MPLSKTGDLT MSETASWQPS ASIPNLLKRA AIMAEIRRFF ADRGVLEVET PCMSQATVTD IHLVPFETRF VGPGHSQGMN LWLMTSPEYH MKRLLVAGCG PVFQLCRSFR NEEMGRYHNP EFTMLEWYRP HYDMYRLMNE VDDLLQQVLD CPAAESLSYQ QAFLRYLEID PLSADKTQLR EVAAKLDLSN VADTEEDRDT LLQLLFTFGV EPNIGKEKPT FVYHFPASQA SLAQISTEDH RVAERFEVYY KGIELANGFH ELTDAREQQQ RFEQDNRKRA ARGLPQHPID QNLIEALKVG MPDCSGVALG VDRLVMLALG AETLAEVIAF SVDRA |
|---|---|
| Mol. Wt |
36.98 kDa (calc) [2] |
| pI | |
| Extinction coefficient |
31400 - 32025 (calc based on 10 Y, 3 W, and 5 C residues) |
| edit table |
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
Domains/Motifs/Modification Sites
| Type | Residues | Description | Notes |
|---|---|---|---|
| edit table |
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
Structure
| Structures |
|
|---|---|
| Models |
View models at: |
| edit table |
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.
Notes
Gene Product Resources
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
Notes
Accessions in Other Databases
| Database | Accession | Notes |
|---|---|---|
|
| ||
| edit table |
See Help:Product_accessions for help entering or editing information in this section of EcoliWiki.
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
See Help:Links_table for how to enter or edit information in this section of EcoliWiki.
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ Butland G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433: 531-7 PubMed EcoliWiki page
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.9 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
Categories
Categories: GO:0005515 ! protein binding | GO:0016874 ! ligase activity | GO:0006430 ! lysyl-tRNA aminoacylation | GO:0006418 ! tRNA aminoacylation for protein translation | GO:0006412 ! translation | GO:0005737 ! cytoplasm | GO:0005524 ! ATP binding | GO:0004824 ! lysine-tRNA ligase activity | GO:0004812 ! aminoacyl-tRNA ligase activity | GO:0000166 ! nucleotide binding | GO:0042867 ! pyruvate catabolic process | Proteins
