Standard name	RpmE
Synonyms	50S ribosomal subunit protein L31^[1], B3936^[2]^[1], RpmE^[2]^[1]
Product description	50S ribosomal subunit protein L31^[2]^[3]; Component of ; 50S ribosomal subunit^[3]; ribosome^[2]^[3]
EC number (for enzymes)
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes	Status
	GO:0046872	metal ion binding	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0479	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0030529	ribonucleoprotein complex	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0687	C	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0019843	rRNA binding	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0699	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0008270	zinc ion binding	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0862	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0006412	translation	GO_REF:0000002 GO_REF:0000020	IEA: Inferred from Electronic Annotation	InterPro:IPR002150 HAMAP:MF_00501	P	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0005840	ribosome	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR002150	C	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0003735	structural constituent of ribosome	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR002150	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0003723	RNA binding	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0694	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0009281	cytosolic ribosome (sensu Bacteria)				C	Seeded from EcoCyc 11.1^[3].	required fields missing
	GO:0005737	cytoplasm				C	Seeded from EcoCyc 11.1^[3].	required fields missing
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Interactions

Partner Type	Partner	Notes
Protein	Subunits of 50S ribosomal subunit	could be indirect
Protein	Subunits of ribosome	could be indirect
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Notes

Localization

Compartment	Description	Evidence	Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence	at EcoCyc MKKDIHPKYE EITASCSCGN VMKIRSTVGH DLNLDVCSKC HPFFTGKQRD VATGGRVDRF NKRFNIPGSK
Mol. Wt	7.87 kDa (calc) ^[2]
pI
Extinction coefficient	1490 - 1990 (calc based on 1 Y, 0 W, and 4 C residues)
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Domains/Motifs/Modification Sites

Type	Residues	Description	Notes
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Structure

Structures	Representative Escherichia coli structure: 2AW4\|Z 1-70 of 70 residues (E-value: 1.6e-36) (Percent Identity: 100.00) Representative homolog: 1NKW\|Y (Deinococcus radiodurans) 1-63 of 70 residues (E-value: 1.7e-09) (Percent Identity: 45.31) View all other structures.
Models	View models at: EcoliPredict ModBase PSI-PRED Protein Quaternary Structure (PQS) Genomes TO Protein (GTOP)
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Structures

Representative Escherichia coli structure:
2AW4|Z
1-70 of 70 residues (E-value: 1.6e-36) (Percent Identity: 100.00)
Representative homolog:
1NKW|Y (Deinococcus radiodurans)
1-63 of 70 residues (E-value: 1.7e-09) (Percent Identity: 45.31)
View all other structures.

Models

View models at:

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Notes

Gene Product Resources

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Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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Database	Accession	Notes
EcoCyc (EcoliWiki Page)	EcoCyc:EG10889-MONOMER
UniProt (EcoliWiki Page)	UniProt:P0A7M9
PFAM (EcoliWiki Page)	PFAM:PF01197
RefSeq (EcoliWiki Page)	RefSeq:NP_418371
ModBase (EcoliWiki Page)	ModBase:P0A7M9
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Notes

Links

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Name	URL	Comments
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References

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↑ ^1.0 ^1.1 ^1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 ^3.2 ^3.3 ^3.4 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 ^4.2 ^4.3 ^4.4 ^4.5 ^4.6 ^4.7 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

rpmE:Gene Product(s)

From EcoliWiki

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

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